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See other SMARCB1 GE Assays ›
Gene Symbol:
SMARCB1
Gene Name:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Gene Aliases:
BAF47, CSS3, INI1, MRD15, PPP1R144, RDT, RTPS1, SNF5, SNF5L1, SWNTS1, Sfh1p, Snr1, hSNFS
Chromosome Location:
Chr.22: 23786931 - 23834518 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs00996890_m1
Size
Availability Made To Order
Catalog # 4351372
Price 417.00
Your Price
Online offer: 387.65
387.65
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: SMARCB1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_003073.4 NP_003064.2 2 - 3 471 103
XM_011530345.2 XP_011528647.1 2 - 3 440 103
GenBank mRNA AJ011737.1 - 2 - 3 379 103
AK299411.1 - 2 - 3 401 103
AL389878.1 - 2 - 3 281 103
AY207471.1 - 1 - 2 84 103
CR456581.1 - 2 - 3 285 103

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2200006862.hg.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SMARCB1

Panther Classification:

Molecular Function -

DNA metabolism protein nucleic acid metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

blastocyst hatching
DNA repair
nucleosome disassembly
chromatin remodeling
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
cell cycle
nervous system development
negative regulation of cell proliferation
DNA integration
covalent chromatin modification
cell differentiation
single stranded viral RNA replication via double stranded DNA intermediate
ATP-dependent chromatin remodeling
positive regulation by host of viral transcription
positive regulation of transcription from RNA polymerase II promoter
positive regulation of sequence-specific DNA binding transcription factor activity
positive regulation of histone H4 acetylation
negative regulation of histone H3-K9 dimethylation
negative regulation of histone H3-K9 trimethylation
positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter
positive regulation of glucose mediated signaling pathway
positive regulation of histone H3-K9 acetylation
regulation of histone H4-K16 acetylation
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
RNA polymerase I CORE element sequence-specific DNA binding
p53 binding
DNA binding
transcription coactivator activity
protein binding
Tat protein binding
nucleosomal DNA binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 TC2200006862.hg.1 Clariom D TC
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 ENST00000263121.11 Ensembl
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 ENST00000344921.10 Ensembl
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 ENST00000407082.3 Ensembl
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 ENST00000407422.7 Ensembl
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 ENST00000417137.5 Ensembl
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 ENST00000491967.1 Ensembl
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 NM_003073.4 Refseq
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 ENST00000263121.11 Ensembl
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 ENST00000344921.10 Ensembl
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 ENST00000407082.3 Ensembl
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 ENST00000407422.7 Ensembl
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 ENST00000417137.5 Ensembl
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 ENST00000491967.1 Ensembl
Affymetrix Human Clariom D Assay PSR2200147338.hg.1 NM_003073.4 Refseq

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