Assay Details

Gene Symbol: TRAK1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001042646.2	NP_001036111.1	3 - 4	578		58
	NM_001265608.1	NP_001252537.1	3 - 4	578		58
	NM_001265609.1	NP_001252538.1	2 - 3	441		58
	NM_001265610.1	NP_001252539.1	2 - 3	441		58
	NM_014965.4	NP_055780.2	2 - 3	381		58
	XM_005264956.2	XP_005265013.1	3 - 4	386		58
	XM_005264958.2	XP_005265015.1	2 - 3	441		58
	XM_005264960.3	XP_005265017.1	3 - 4	386		58
	XM_005264962.3	XP_005265019.1	3 - 4	386		58
	XM_005264963.3	XP_005265020.1	3 - 4	386		58
	XM_006713029.2	XP_006713092.1	3 - 4	386		58
	XM_006713030.2	XP_006713093.1	3 - 4	386		58
	XM_006713031.3	XP_006713094.1	3 - 4	386		58
	XM_011533489.2	XP_011531791.1	3 - 4	386		58
	XM_017005906.1	XP_016861395.1	5 - 6	999		58
	XM_017005907.1	XP_016861396.1	2 - 3	363		58
	XM_017005908.1	XP_016861397.1	2 - 3	441		58
	XM_017005909.1	XP_016861398.1	4 - 5	884		58
	XM_017005910.1	XP_016861399.1	2 - 3	441		58
	XM_017005911.1	XP_016861400.1	4 - 5	884		58
	XM_017005912.1	XP_016861401.1	3 - 4	386		58
	XM_017005913.1	XP_016861402.1	3 - 4	386		58
GenBank mRNA	AB028965.1	-	3 - 4	578		58
	AK000754.1	-	2 - 3	357		58
	AK294221.1	-	2 - 3	407		58
	AK295480.1	-	3 - 4	616		58
	AK295848.1	-	3 - 4	485		58
	AK316260.1	-	3 - 4	475		58
	AL713787.1	-	2 - 3	345		58
	BC015922.1	-	2 - 3	368	4562916	58
	BX647199.1	-	2 - 3	381		58
	DA193280.1	-	2 - 3	442		58

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300013812.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03000217.hg.1

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

Mammalian Gene Collection

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TRAK1

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03004335.hg.1	TC03000217.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03004335.hg.1	ENST00000327628.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004335.hg.1	ENST00000341421.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004335.hg.1	ENST00000396175.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004335.hg.1	ENST00000449246.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004335.hg.1	ENST00000487159.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004335.hg.1	ENST00000543338.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004335.hg.1	NM_001042646.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03004335.hg.1	NM_014965.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300203759.hg.1	ENST00000449246.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203759.hg.1	ENST00000613405.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203759.hg.1	NM_001265609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203759.hg.1	NM_001265610.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203759.hg.1	ENST00000449246.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203759.hg.1	ENST00000613405.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203759.hg.1	NM_001265609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203759.hg.1	NM_001265610.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203759.hg.1	TC0300013812.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300203758.hg.1	ENST00000449246.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203758.hg.1	ENST00000613405.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203758.hg.1	NM_001265609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203758.hg.1	NM_001265610.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203758.hg.1	ENST00000449246.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203758.hg.1	ENST00000613405.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203758.hg.1	NM_001265609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203758.hg.1	NM_001265610.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203758.hg.1	TC0300013812.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300203760.hg.1	ENST00000418790.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203760.hg.1	ENST00000449246.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203760.hg.1	ENST00000613405.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203760.hg.1	NM_001265609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203760.hg.1	NM_001265610.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203760.hg.1	ENST00000418790.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203760.hg.1	ENST00000449246.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203760.hg.1	ENST00000613405.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203760.hg.1	NM_001265609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203760.hg.1	NM_001265610.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203760.hg.1	TC0300013812.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300203761.hg.1	ENST00000418790.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203761.hg.1	ENST00000449246.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203761.hg.1	ENST00000613405.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203761.hg.1	NM_001265609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203761.hg.1	NM_001265610.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203761.hg.1	ENST00000418790.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203761.hg.1	ENST00000449246.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203761.hg.1	ENST00000613405.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203761.hg.1	NM_001265609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203761.hg.1	NM_001265610.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203761.hg.1	TC0300013812.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000327628.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000341421.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000396175.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000418790.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000449246.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000469506.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000484786.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000613405.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	NM_001042646.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	NM_001265608.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	NM_001265609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	NM_001265610.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	NM_014965.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000327628.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000341421.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000396175.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000418790.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000449246.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000469506.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000484786.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	ENST00000613405.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	NM_001042646.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	NM_001265608.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	NM_001265609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	NM_001265610.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	NM_014965.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300203770.hg.1	TC0300013812.hg.1	Clariom D TC

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Genomic Map