Assay Details

Gene Symbol: TRAK1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001042646.2	NP_001036111.1	2 - 3	506		70
	NM_001265608.1	NP_001252537.1	2 - 3	506		70
	XM_005264956.2	XP_005265013.1	2 - 3	314		70
	XM_005264960.3	XP_005265017.1	2 - 3	314		70
	XM_005264962.3	XP_005265019.1	2 - 3	314		70
	XM_005264963.3	XP_005265020.1	2 - 3	314		70
	XM_006713029.2	XP_006713092.1	2 - 3	314		70
	XM_006713030.2	XP_006713093.1	2 - 3	314		70
	XM_006713031.3	XP_006713094.1	2 - 3	314		70
	XM_011533489.2	XP_011531791.1	2 - 3	314		70
	XM_017005906.1	XP_016861395.1	4 - 5	927		70
	XM_017005909.1	XP_016861398.1	3 - 4	812		70
	XM_017005911.1	XP_016861400.1	3 - 4	812		70
	XM_017005912.1	XP_016861401.1	2 - 3	314		70
	XM_017005913.1	XP_016861402.1	2 - 3	314		70
GenBank mRNA	AB028965.1	-	2 - 3	506		70
	AK295480.1	-	2 - 3	544		70
	AK295848.1	-	2 - 3	413		70
	AK316260.1	-	2 - 3	403		70

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300013812.hg
This assay targets the same location as HTA transcript cluster(s) TC03000217.hg

Additional Information:

This assay is in the 5'UTR region of the XM_017005909.1,XM_017005911.1 transcripts.

Set Membership:

Amplicon length less than or equal to 70

Homo sapiens

Probe spans exons

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03004324.hg.1	TC03000217.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03004324.hg.1	ENST00000327628.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004324.hg.1	NM_001042646.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03004325.hg.1	TC03000217.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03004325.hg.1	ENST00000327628.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004325.hg.1	ENST00000543338.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004325.hg.1	NM_001042646.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03004326.hg.1	TC03000217.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03004326.hg.1	ENST00000327628.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004326.hg.1	ENST00000487159.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004326.hg.1	ENST00000543338.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004326.hg.1	NM_001042646.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300203753.hg.1	ENST00000327628.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203753.hg.1	NM_001042646.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300203753.hg.1	NM_001265608.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203753.hg.1	ENST00000327628.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203753.hg.1	NM_001042646.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300203753.hg.1	NM_001265608.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203753.hg.1	TC0300013812.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300203757.hg.1	ENST00000327628.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203757.hg.1	ENST00000484786.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203757.hg.1	NM_001042646.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300203757.hg.1	NM_001265608.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203757.hg.1	ENST00000327628.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203757.hg.1	ENST00000484786.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203757.hg.1	NM_001042646.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300203757.hg.1	NM_001265608.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203757.hg.1	TC0300013812.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300203755.hg.1	ENST00000327628.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203755.hg.1	NM_001042646.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300203755.hg.1	NM_001265608.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203755.hg.1	ENST00000327628.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0300203755.hg.1	NM_001042646.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300203755.hg.1	NM_001265608.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300203755.hg.1	TC0300013812.hg.1	Clariom D TC

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Genomic Map