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See other SMARCC1 GE Assays ›
Gene Symbol:
SMARCC1
Gene Name:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
Gene Aliases:
BAF155, CRACC1, Rsc8, SRG3, SWI3
Chromosome Location:
Chr.3: 47585888 - 47781915 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01024799_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: SMARCC1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_003074.3 NP_003065.3 22 - 23 2499 71
XM_011534034.1 XP_011532336.1 22 - 23 2230 71
GenBank mRNA AK302541.1 - 23 - 24 2274 71
BC021862.1 - 22 - 23 2436 71
BC032564.1 - 22 - 23 2483 71
BC039843.1 - 22 - 23 2403 71
BC040242.1 - 7 - 8 931 71
BC050564.1 - 22 - 23 2428 3912713 71
BC065253.1 - 22 - 23 2468 71
BC113465.1 - 22 - 23 2447 8322517 71
BC117213.1 - 22 - 23 2447 40125764 71
U66615.1 - 22 - 23 2432 71

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300010990.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03001370.hg.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SMARCC1

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Function(s) Process(es)

nucleosome disassembly
chromatin remodeling
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
nervous system development
insulin receptor signaling pathway
organ morphogenesis
covalent chromatin modification
prostate gland development
negative regulation of proteasomal ubiquitin-dependent protein catabolic process
ATP-dependent chromatin remodeling
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
transcription coactivator activity
protein binding
nucleosomal DNA binding
protein N-terminus binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR03023607.hg.1 TC03001370.hg.1 HTA TC
Affymetrix Human Transcriptome Array 2.0 PSR03023607.hg.1 ENST00000254480.5 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03023607.hg.1 ENST00000425518.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03023607.hg.1 NM_003074.3 Refseq
Affymetrix Human Clariom D Assay PSR0300180330.hg.1 ENST00000254480.9 Ensembl
Affymetrix Human Clariom D Assay PSR0300180330.hg.1 ENST00000425518.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180330.hg.1 NM_003074.3 Refseq
Affymetrix Human Clariom D Assay PSR0300180330.hg.1 ENST00000254480.9 Ensembl
Affymetrix Human Clariom D Assay PSR0300180330.hg.1 ENST00000425518.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180330.hg.1 NM_003074.3 Refseq
Affymetrix Human Clariom D Assay PSR0300180330.hg.1 TC0300010990.hg.1 Clariom D TC

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