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See other PTPN23 GE Assays ›
Gene Symbol:
PTPN23
Gene Name:
protein tyrosine phosphatase, non-receptor type 23
Gene Aliases:
HD-PTP, HDPTP, PTP-TD14
Chromosome Location:
Chr.3: 47380982 - 47413441 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01064661_g1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: PTPN23
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001304482.1 NP_001291411.1 21 - 22 4161 145
NM_015466.3 NP_056281.1 22 - 23 4289 145
XM_005265031.2 XP_005265088.2 22 - 23 4240 145
GenBank mRNA AB025194.1 - 22 - 23 4237 145
AF169350.1 - 2 - 3 125 145
AF290614.1 - 22 - 23 4235 145
AK289502.1 - 22 - 23 4238 145
AK295877.1 - 22 - 23 3060 145
AK295888.1 - 22 - 23 3754 145
AK299906.1 - 21 - 22 4132 145
AL110210.1 - 4 - 5 2237 145
BC004881.2 - 3 - 4 1123 145
BC027711.2 - 11 - 12 3228 145
BC089042.1 - 22 - 23 4207 6579163 145
BT009758.1 - 3 - 4 997 145
BU173747.1 - 3 - 4 310 145

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300007294.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03000268.hg.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Protein Phosphatase Mammalian Gene Collection Detect Genomic DNA Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTPN23

Panther Classification:

Molecular Function -

membrane traffic protein protein phosphatase protein modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of epithelial cell migration
protein transport
peptidyl-tyrosine dephosphorylation
ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
cilium morphogenesis
positive regulation of homophilic cell adhesion
positive regulation of adherens junction organization
positive regulation of early endosome to late endosome transport
protein tyrosine phosphatase activity
protein binding
protein kinase binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR03005500.hg.1 TC03000268.hg.1 HTA TC
Affymetrix Human Transcriptome Array 2.0 PSR03005500.hg.1 ENST00000265562.4 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03005500.hg.1 ENST00000456408.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03005500.hg.1 NM_015466.3 Refseq
Affymetrix Human Clariom D Assay PSR0300151761.hg.1 ENST00000265562.4 Ensembl
Affymetrix Human Clariom D Assay PSR0300151761.hg.1 ENST00000602307.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300151761.hg.1 NM_001304482.1 Refseq
Affymetrix Human Clariom D Assay PSR0300151761.hg.1 NM_015466.3 Refseq
Affymetrix Human Clariom D Assay PSR0300151761.hg.1 ENST00000265562.4 Ensembl
Affymetrix Human Clariom D Assay PSR0300151761.hg.1 ENST00000602307.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300151761.hg.1 NM_001304482.1 Refseq
Affymetrix Human Clariom D Assay PSR0300151761.hg.1 NM_015466.3 Refseq
Affymetrix Human Clariom D Assay PSR0300151761.hg.1 TC0300007294.hg.1 Clariom D TC

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