Assay Details

Gene Symbol: CLDN1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_021101.4	NP_066924.1	1 - 2	468		71
GenBank mRNA	AF101051.1	-	1 - 2	448		71
	AF114837.1	-	1 - 2	457		71
	AF134160.1	-	1 - 2	475		71
	AK296934.1	-	2 - 3	349		71
	AK312866.1	-	1 - 2	464		71
	AY358652.1	-	1 - 2	446		71
	BC012471.1	-	1 - 2	426	4500534	71
	CR457138.1	-	1 - 2	228		71
	EF564137.1	-	1 - 2	228		71

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300013520.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03002108.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

Mammalian Gene Collection

Homo sapiens

1700

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CLDN1

Panther Classification:

Molecular Function -

tight junction

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03037298.hg.1	TC03002108.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03037298.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03037298.hg.1	ENST00000545382.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03037298.hg.1	NM_021101.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03037297.hg.1	TC03002108.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03037297.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03037297.hg.1	ENST00000545382.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03037297.hg.1	NM_021101.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03037293.hg.1	TC03002108.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03037293.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03037293.hg.1	ENST00000545382.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03037293.hg.1	NM_021101.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03037296.hg.1	TC03002108.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03037296.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03037296.hg.1	NM_021101.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03037295.hg.1	TC03002108.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03037295.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03037295.hg.1	ENST00000545382.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03037295.hg.1	NM_021101.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	ENST00000490800.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	ENST00000490800.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	ENST00000490800.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300200873.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0300200873.hg.1	ENST00000490800.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300200873.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300200873.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0300200873.hg.1	ENST00000490800.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300200873.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300200873.hg.1	TC0300013520.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300200877.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0300200877.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300200877.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0300200877.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300200877.hg.1	TC0300013520.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	ENST00000490800.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	ENST00000490800.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	ENST00000490800.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	TC0300013520.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300200875.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0300200875.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300200875.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0300200875.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300200875.hg.1	TC0300013520.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300200876.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0300200876.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300200876.hg.1	ENST00000295522.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0300200876.hg.1	NM_021101.4	Refseq
Affymetrix Human Clariom D Assay	PSR0300200876.hg.1	TC0300013520.hg.1	Clariom D TC

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Catalog #	4351372
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Genomic Map