Assay Details

Gene Symbol: E2F6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001278275.1	NP_001265204.1	2 - 3	475		149
RefSeq	XM_017003548.1	XP_016859037.1	2 - 3	475		149
GenBank mRNA	AY083996.1	-	2 - 3	454		149
GenBank mRNA	AY551347.1	-	2 - 3	177		149

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DA770124.1	-	2 - 3	441	Chr. 2 - 11453723 - 11466143 [-] on Build GRCh38	149
GenBankmRNA	DA728788.1	-	2 - 3	449	Chr. 2 - 11453560 - 11466151 [-] on Build GRCh38	149
GenBankmRNA	DA561606.1	-	2 - 3	447	Chr. 2 - 11453718 - 11466149 [-] on Build GRCh38	149
GenBankmRNA	DA616789.1	-	3 - 4	384	Chr. 2 - 11453709 - 11466151 [-] on Build GRCh38	149

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	long intergenic non-protein coding RNA 570	LINC00570	ncRNA-a5	-54.1kb	Anti-sense	Chr. 2 - 11393981 - 11403077 on NCBI Build GRCh38
Downstream	growth regulation by estrogen in breast cancer 1	GREB1		75.8kb	Anti-sense	Chr. 2 - 11534116 - 11642788 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200011753.hg.1

Additional Information:

This assay is in the 5'UTR region of the AY083996.1,AY551347.1,NM_001278275.1,XM_017003548.1 transcripts.

Set Membership:

Amplicon length greater than or equal to 101

Homo sapiens

Probe spans exons

Panther Classification:

Molecular Function -

RNA metabolism protein

nucleic acid metabolism protein

general transcription factor

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000307236.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000381525.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000428221.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000437573.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000444832.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000455198.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000468775.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000498701.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000542100.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	NM_001278275.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	NM_001278276.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	NM_001278277.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	NM_198256.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	NM_212540.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	NR_103490.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000307236.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000381525.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000428221.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000437573.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000444832.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000455198.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000468775.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000498701.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	ENST00000542100.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	NM_001278275.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	NM_001278276.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	NM_001278277.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	NM_198256.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	NM_212540.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	NR_103490.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200185459.hg.1	TC0200011753.hg.1	Clariom D TC

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System Message

Genomic Map