LINC00685
Genomic Map
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| Gene Symbol: LINC00685 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_027231.1 | 1 - 2 | 405 | 92 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | GTP binding protein 6 (putative) | GTPBP6 | PGPL | -326.0 | Anti-sense | Chr. X - 304750 - 318819 on NCBI Build GRCh38 |
| Downstream | protein phosphatase 2 regulatory subunit B''beta | PPP2R3B |
NYREN8, PPP2R3L, PPP2R3LY, PR48 |
12.6kb | Anti-sense | Chr. Y - 333933 - 386955 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0X00006434.hg.1This assay targets the same location as HTA transcript cluster(s) TC0X000002.hg.1, TC0Y000002.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Homo sapiens
Probe spans exons
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3722568 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 11033 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3722568 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3722568 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix HT HG-U133+ PM Array Plate | 232463_PM_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X000040.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X000040.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X000040.hg.1 | TC0X000002.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR0Y000024.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR0Y000024.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0Y000024.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0Y000024.hg.1 | TC0Y000002.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006434.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X000038.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X000038.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X000038.hg.1 | TC0X000002.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X000039.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X000039.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X000039.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X000039.hg.1 | TC0X000002.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC0Y00006434.hg.1 | ENSTR0000391707.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0Y00006434.hg.1 | ENSTR0000391707.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0Y00006434.hg.1 | ENSTR0000391707.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0Y00006434.hg.1 | ENSTR0000391707.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR0Y000023.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0Y000023.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0Y000023.hg.1 | TC0Y000002.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR0Y000025.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0Y000025.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0Y000025.hg.1 | TC0Y000002.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR0X00144094.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144094.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144094.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144094.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144094.hg.1 | TC0X00006434.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0X00144091.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144091.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144091.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144091.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144091.hg.1 | TC0X00006434.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0X00144096.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144096.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144096.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144096.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144096.hg.1 | TC0X00006434.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006434.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0Y00006434.hg.1 | ENSTR0000391707.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0Y00006434.hg.1 | ENSTR0000391707.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0Y00006434.hg.1 | ENSTR0000391707.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0Y00006434.hg.1 | ENSTR0000391707.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0X00144093.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144093.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144093.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144093.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144093.hg.1 | TC0X00006434.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0X00144095.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0X00144095.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0X00144095.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144095.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144095.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0X00144095.hg.1 | ENST00000391707.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0X00144095.hg.1 | NR_027231.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144095.hg.1 | NR_027232.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00144095.hg.1 | TC0X00006434.hg.1 | Clariom D TC |
| Human Genome U133 Plus 2.0 Array | 232463_at | - | - |
| Human Genome U133 Plus 2.0 Array | 232463_PM_at | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 232463_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 232463_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 232463_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 232463_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 232463_at5 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 232463_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 232463_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 232463_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 232463_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 232463_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 232463_at8 | - | - |
| Human Genome U133 Set | 232463_at | - | - |
| Human Genome U133 Set | 232463_PM_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A042004 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A040629 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A040630 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A040629 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A040630 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A042004 | - | - |
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