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See other LINC00685 GE Assays ›
Gene Symbol:
LINC00685
Gene Name:
long intergenic non-protein coding RNA 685
Gene Aliases:
CXYorf10, NCRNA00107, PPP2R3B-AS1
Chromosome Location:
Chr.Y: 319145 - 321332 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs03678603_s1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: LINC00685
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_027232.1 1 945 70
GenBank mRNA AK023454.1 - 1 904 70
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BE392433.1 - 1 452 Chr. X - 319638 - 320209 [+] on Build GRCh38 70
GenBankmRNA BI819123.1 - 1 485 Chr. X - 319604 - 320466 [+] on Build GRCh38 70

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream GTP binding protein 6 (putative) GTPBP6 PGPL -326.0 Anti-sense Chr. X - 304750 - 318819 on NCBI Build GRCh38
Downstream protein phosphatase 2 regulatory subunit B''beta PPP2R3B NYREN8,
PPP2R3L,
PPP2R3LY,
PR48
12.6kb Anti-sense Chr. Y - 333933 - 386955 on NCBI Build GRCh38

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00006434.hg.1

Set Membership:

Amplicon length less than or equal to 70 3' Most Detect Genomic DNA Homo sapiens Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Clariom D Assay PSR0X00144092.hg.1 NR_027232.1 Refseq
Affymetrix Human Clariom D Assay PSR0X00144092.hg.1 NR_027232.1 Refseq
Affymetrix Human Clariom D Assay PSR0X00144092.hg.1 TC0X00006434.hg.1 Clariom D TC

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