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See other H2AFY GE Assays ›
Gene Symbol:
H2AFY
Gene Name:
H2A histone family member Y
Gene Aliases:
H2A.y, H2A/y, H2AF12M, MACROH2A1.1, mH2A1, macroH2A1.2
Chromosome Location:
Chr.5: 135334381 - 135399887 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs03844896_s1
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Availability Made To Order
Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: H2AFY
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq XM_017010069.1 XP_016865558.1 6 87
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AW383922.1 - 1 261 Chr. 5 - 135344421 - 135344795 [+] on Build GRCh38 87
GenBankmRNA BE302031.1 - 1 250 Chr. 5 - 135344386 - 135344837 [+] on Build GRCh38 87
GenBankmRNA BE709670.1 - 1 137 Chr. 5 - 135344508 - 135345044 [+] on Build GRCh38 87
GenBankmRNA AI186460.1 - 1 248 Chr. 5 - 135344388 - 135344814 [+] on Build GRCh38 87
GenBankmRNA AI913975.1 - 1 250 Chr. 5 - 135344386 - 135344813 [+] on Build GRCh38 87
GenBankmRNA AA916685.1 - 1 250 Chr. 5 - 135344387 - 135344878 [+] on Build GRCh38 87
GenBankmRNA DA251694.1 - 1 Chr. 5 - 135344428 - 135345014 [-] on Build GRCh38 87
GenBankmRNA N64366.1 - 1 250 Chr. 5 - 135344387 - 135344816 [+] on Build GRCh38 87
GenBankmRNA BM679209.1 - 1 267 Chr. 5 - 135344374 - 135345062 [+] on Build GRCh38 87
GenBankmRNA AI209045.1 - 1 248 Chr. 5 - 135344388 - 135344762 [+] on Build GRCh38 87
GenBankmRNA AI186495.1 - 1 249 Chr. 5 - 135344387 - 135344747 [+] on Build GRCh38 87
GenBankmRNA BF222796.1 - 1 249 Chr. 5 - 135344387 - 135344911 [+] on Build GRCh38 87
GenBankmRNA G36680.1 - 1 250 Chr. 5 - 135344387 - 135344816 [+] on Build GRCh38 87
GenBankmRNA AL702966.1 - 1 Chr. 5 - 135344497 - 135345251 [-] on Build GRCh38 87
GenBankmRNA BE503981.1 - 1 249 Chr. 5 - 135344387 - 135344913 [+] on Build GRCh38 87

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream chromosome 5 open reading frame 66 C5orf66 Sense Chr. 5 - 135033280 - 135344680 on NCBI Build GRCh38
Downstream dendritic cell associated nuclear protein DCANP1 C5orf20,
DCNP1
99.4kb Anti-sense Chr. 5 - 135444214 - 135447348 on NCBI Build GRCh38

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect transcript(s) from off target gene(s). Please contact Tech Support if you need more information.

Set Membership:

Amplicon length between 86 and 100 Detect Genomic DNA Homo sapiens Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

histone

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
regulation of cell growth
nucleosome assembly
chromatin silencing
dosage compensation
covalent chromatin modification
regulation of lipid metabolic process
negative regulation of histone phosphorylation
positive regulation of maintenance of mitotic sister chromatid cohesion
regulation of gene expression, epigenetic
positive regulation of keratinocyte differentiation
negative regulation of gene expression, epigenetic
positive regulation of gene expression, epigenetic
negative regulation of histone H3-K4 methylation
negative regulation of histone H3-K27 methylation
regulation of chromatin silencing at rDNA
establishment of protein localization to chromatin
negative regulation of protein serine/threonine kinase activity
negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter
negative regulation of cell cycle G2/M phase transition
negative regulation of protein localization to chromosome, telomeric region
rDNA binding
RNA polymerase II regulatory region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
core promoter sequence-specific DNA binding
DNA binding
protein binding
double-stranded methylated DNA binding
enzyme binding
protein kinase binding
protein serine/threonine kinase inhibitor activity
chromatin DNA binding
nucleosomal DNA binding
transcription regulatory region DNA binding
protein heterodimerization activity

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