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See other TFDP2 GE Assays ›
Gene Symbol:
TFDP2
Gene Name:
transcription factor Dp-2
Gene Aliases:
DP2
Chromosome Location:
Chr.3: 141944428 - 142149544 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs03868029_s1
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Availability Made To Order
Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: TFDP2
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001178138.1 NP_001171609.1 14 7204 102
NM_001178139.1 NP_001171610.1 13 7166 102
NM_001178140.1 NP_001171611.1 10 6662 102
NM_001178141.1 NP_001171612.1 10 6595 102
NM_001178142.1 NP_001171613.1 8 6443 102
NM_006286.4 NP_006277.1 11 6720 102
XM_005247731.2 XP_005247788.1 13 7169 102
XM_011513101.2 XP_011511403.1 14 7265 102
XM_011513102.2 XP_011511404.1 12 6838 102
XM_011513106.2 XP_011511408.1 14 7262 102
XM_011513108.2 XP_011511410.1 11 6992 102
XM_011513109.2 XP_011511411.1 9 6564 102
XM_011513111.2 XP_011511413.1 9 6561 102
XM_017007091.1 XP_016862580.1 13 7177 102
XM_017007092.1 XP_016862581.1 16 7423 102
XM_017007093.1 XP_016862582.1 16 7612 102
XM_017007094.1 XP_016862583.1 13 7198 102
XM_017007095.1 XP_016862584.1 15 7388 102
XM_017007096.1 XP_016862585.1 12 7095 102
XM_017007097.1 XP_016862586.1 14 7194 102
XM_017007098.1 XP_016862587.1 14 7342 102
XM_017007099.1 XP_016862588.1 15 7317 102
XM_017007101.1 XP_016862590.1 13 7150 102
XM_017007102.1 XP_016862591.1 11 6945 102
GenBank mRNA AK096450.1 - 1 250 102
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BF797567.1 - 1 211 Chr. 3 - 141944719 - 141947352 [-] on Build GRCh38 102
GenBankmRNA BM464287.1 - 502 Chr. - - [-] on Build 102
GenBankmRNA AW612322.1 - 1 Chr. 3 - 141946988 - 141947408 [+] on Build GRCh38 102
GenBankmRNA BU596890.1 - 1 194 Chr. 3 - 141946601 - 141947333 [-] on Build GRCh38 102
GenBankmRNA DA766812.1 - 1 250 Chr. 3 - 141946820 - 141947391 [-] on Build GRCh38 102
GenBankmRNA AI784151.1 - 1 Chr. 3 - 141947015 - 141947248 [+] on Build GRCh38 102
GenBankmRNA HY114495.1 - 1 249 Chr. 3 - 141946999 - 141947390 [-] on Build GRCh38 102
GenBankmRNA DA233188.1 - 2 503 Chr. 3 - 141947046 - 141948656 [-] on Build GRCh38 102
GenBankmRNA DB135683.1 - 1 286 Chr. 3 - 141946975 - 141947426 [-] on Build GRCh38 102
GenBankmRNA AW044420.1 - 1 Chr. 3 - 141947023 - 141947448 [+] on Build GRCh38 102
GenBankmRNA HY104526.1 - 1 374 Chr. 3 - 141947053 - 141947515 [-] on Build GRCh38 102
GenBankmRNA BE644915.1 - 1 Chr. 3 - 141947015 - 141947446 [+] on Build GRCh38 102
GenBankmRNA DB155360.1 - 1 Chr. 3 - 141946937 - 141947506 [-] on Build GRCh38 102

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream ATPase Na+/K+ transporting subunit beta 3 ATP1B3 ATPB-3,
CD298
-18.6kb Anti-sense Chr. 3 - 141876628 - 141926540 on NCBI Build GRCh38
Downstream glycerol kinase 5 (putative) GK5 210.1kb Sense Chr. 3 - 142157527 - 142225607 on NCBI Build GRCh38

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300012654.hg.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Apoptosis 3' Most Detect Genomic DNA Homo sapiens 1700 Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TFDP2

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Function(s) Process(es)

transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
RNA polymerase II transcription factor activity, sequence-specific DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription cofactor activity
protein binding
transcription factor binding
protein domain specific binding

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 ENST00000489671.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 ENST00000499676.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 ENST00000602556.1 Ensembl
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 NM_001178138.1 Refseq
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 NM_001178139.1 Refseq
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 NM_001178140.1 Refseq
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 NM_001178141.1 Refseq
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 NM_001178142.1 Refseq
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 NM_006286.4 Refseq
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 ENST00000489671.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 ENST00000499676.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 ENST00000602556.1 Ensembl
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 NM_001178138.1 Refseq
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 NM_001178139.1 Refseq
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 NM_001178140.1 Refseq
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 NM_001178141.1 Refseq
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 NM_001178142.1 Refseq
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 NM_006286.4 Refseq
Affymetrix Human Clariom D Assay PSR0300194458.hg.1 TC0300012654.hg.1 Clariom D TC
Array Name Probe IDs Targets Target Type
ABI Human Genome Survey Microarray Version 2.0 162141 - -
ABI Human Genome Survey Microarray Version 2.0 210503 - -

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Host server : magellan-search-green-659f68c6f4-wf7gw:80/100.66.73.223:80.
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git-url: https://github.com/thermofisher/magellan-search
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