Assay Details

Gene Symbol: GJA1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000165.4	NP_000156.1	2	974		92
GenBank mRNA	AK223289.1	-	2	905		92
	AK294670.1	-	3	673		92
	AK295460.1	-	3	819		92
	AK297402.1	-	2	666		92
	AK297764.1	-	3	858		92
	AK312324.1	-	2	916		92
	BC026329.1	-	2	790	4794131	92
	CR541660.1	-	1	702		92
	M65188.1	-	2	867		92
	X52947.1	-	2	859		92

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600009310.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000945.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene GJA1

Panther Classification:

Molecular Function -

gap junction

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06010981.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010981.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010983.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010983.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010983.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010983.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010984.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010984.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010984.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010984.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010986.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010986.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010986.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010986.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010988.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010988.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010988.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010982.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010982.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010982.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010990.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010990.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010990.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010990.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010992.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010992.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010992.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010992.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0500011669.hg.1	ENST00000511478.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010991.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010991.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010991.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010991.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0600163784.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163784.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163784.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163784.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163784.hg.1	TC0600009310.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600163787.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163787.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163787.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163787.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163787.hg.1	TC0600009310.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600163788.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163788.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163788.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163788.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163788.hg.1	TC0600009310.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600163783.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163783.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163783.hg.1	TC0600009310.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500011669.hg.1	ENST00000511478.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163785.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163785.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163785.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163785.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163785.hg.1	TC0600009310.hg.1	Clariom D TC

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