Name: [Hs04403473_m1] [LSAMP-AS1]
Creator: Thermo Fisher Scientific
Keywords: [LSAMP-AS1] Assay, [LSAMP antisense RNA 1] Assay

Assay Details

Gene Symbol: LSAMP-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_109998.1		3 - 4	294		100
GenBank mRNA	BX110108.1	-	3 - 4	294		100

Interrogated Sequence		Translated Protein	Exon Boundary	Transcript Location	Amplicon Length
GenBankmRNA	AI761449.1	-	1 - 2	Chr. 3 - 116367959 - 116370090 [-] on Build GRCh38	100
GenBankmRNA	AI828835.1	-	1 - 2	Chr. 3 - 116360032 - 116370084 [-] on Build GRCh38	100
GenBankmRNA	BF223896.1	-	1 - 2	Chr. 3 - 116368146 - 116370084 [-] on Build GRCh38	100
GenBankmRNA	AI041998.1	-	1 - 2	Chr. 3 - 116368012 - 116370090 [-] on Build GRCh38	100
GenBankmRNA	BF509771.1	-	1 - 2	Chr. 3 - 116360040 - 116370094 [-] on Build GRCh38	100
GenBankmRNA	AA772004.1	-	1 - 2	Chr. 3 - 116368149 - 116370090 [-] on Build GRCh38	100
GenBankmRNA	BE503340.1	-	1 - 2	Chr. 3 - 116368000 - 116370084 [-] on Build GRCh38	100

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	limbic system-associated membrane protein	LSAMP	IGLON3, LAMP		Anti-sense	Chr. 3 - 115802363 - 116445542 on NCBI Build GRCh38
Downstream	tumor suppressor candidate 7 (non-protein coding)	TUSC7	LINC00902, LSAMP-AS1, LSAMP-AS3, LSAMPAS3, NCRNA00295	339.7kb	Sense	Chr. 3 - 116709788 - 116717040 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300008418.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0300008418.hg.1	ENST00000490351.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008418.hg.1	ENST00000490351.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008418.hg.1	ENST00000490351.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008418.hg.1	ENST00000490351.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008418.hg.1	NR_109998.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008418.hg.1	NR_109998.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008418.hg.1	NR_109998.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008418.hg.1	NR_109998.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008418.hg.1	ENST00000490351.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008418.hg.1	ENST00000490351.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008418.hg.1	ENST00000490351.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008418.hg.1	ENST00000490351.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008418.hg.1	NR_109998.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008418.hg.1	NR_109998.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008418.hg.1	NR_109998.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008418.hg.1	NR_109998.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300160077.hg.1	ENST00000490351.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300160077.hg.1	NR_109998.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300160077.hg.1	ENST00000490351.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300160077.hg.1	NR_109998.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300160077.hg.1	TC0300008418.hg.1	Clariom D TC

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System Message

Genomic Map