Name: [Hs04404972_m1] [PTPRD-AS2]
Creator: Thermo Fisher Scientific
Keywords: [PTPRD-AS2] Assay, [PTPRD antisense RNA 2 (head to head)] Assay

Assay Details

Gene Symbol: PTPRD-AS2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_110696.1		1 - 2	218		94

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	protein tyrosine phosphatase, receptor type D	PTPRD	HPTP, HPTPD, HPTPDELTA, PTPD, RPTPDELTA	-483.0	Anti-sense	Chr. 9 - 8314246 - 10612840 on NCBI Build GRCh38
Downstream	histone-lysine N-methyltransferase SETMAR-like	LOC105375975		993.6kb	Anti-sense	Chr. 9 - 11610222 - 11618749 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900006639.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1600009657.hg.1	ENST00000574654.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009657.hg.1	ENST00000574654.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009657.hg.1	ENST00000575772.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009657.hg.1	ENST00000575772.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009657.hg.1	ENST00000575772.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009657.hg.1	ENST00000575772.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009657.hg.1	ENST00000575772.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009657.hg.1	ENST00000575772.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006639.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006639.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006639.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006639.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006639.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006639.hg.1	NR_110696.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006639.hg.1	NR_110696.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006639.hg.1	NR_110696.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006639.hg.1	NR_110696.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006639.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145423.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900145423.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145423.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900145423.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145423.hg.1	TC0900006639.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900145422.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900145422.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145422.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900145422.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145422.hg.1	TC0900006639.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900145425.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900145425.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145425.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900145425.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145425.hg.1	TC0900006639.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900145428.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900145428.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145428.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900145428.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145428.hg.1	TC0900006639.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0900006639.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900006639.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900006639.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900006639.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900006639.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900006639.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006639.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006639.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006639.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006639.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145429.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900145429.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145429.hg.1	ENST00000429581.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900145429.hg.1	NR_110696.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145429.hg.1	TC0900006639.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1600009657.hg.1	ENST00000574654.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009657.hg.1	ENST00000574654.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009657.hg.1	ENST00000575772.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009657.hg.1	ENST00000575772.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009657.hg.1	ENST00000575772.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009657.hg.1	ENST00000575772.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009657.hg.1	ENST00000575772.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009657.hg.1	ENST00000575772.1	Ensembl

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System Message

Genomic Map