Name: [Hs04406942_m1] [LINC01609]
Creator: Thermo Fisher Scientific
Keywords: [LINC01609] Assay, [long intergenic non-protein coding RNA 1609] Assay

Assay Details

Gene Symbol: LINC01609
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_125418.1		1 - 2	114		105
GenBank mRNA	DB448904.1	-	1 - 2	82		105

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	long intergenic non-protein coding RNA 1608	LINC01608		-89.1kb	Sense	Chr. 8 - 110937690 - 111027433 on NCBI Build GRCh38
Downstream	CUB and Sushi multiple domains 3	CSMD3		986.7kb	Sense	Chr. 8 - 112222928 - 113437499 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800011500.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	ENST00000522778.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	ENST00000522778.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	ENST00000522778.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	NR_125418.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	NR_125418.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	NR_125418.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	NR_125418.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	NR_125418.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800011500.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800178241.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800178241.hg.1	ENST00000522778.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800178241.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800178241.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800178241.hg.1	ENST00000522778.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800178241.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800178241.hg.1	TC0800011500.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	ENST00000522778.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	ENST00000522778.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	ENST00000522778.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	TC0800011500.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800178242.hg.1	ENST00000522778.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800178242.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800178242.hg.1	ENST00000522778.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800178242.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800178242.hg.1	TC0800011500.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800178239.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800178239.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800178239.hg.1	ENST00000519506.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800178239.hg.1	NR_125418.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800178239.hg.1	TC0800011500.hg.1	Clariom D TC

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Genomic Map