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See other SMUG1 GE Assays ›
Gene Symbol:
Smug1
Gene Name:
single-strand selective monofunctional uracil DNA glycosylase
Gene Aliases:
1200013B09Rik, A930006H09Rik, C85220
Chromosome Location:
Chr.15: 103153290 - 103168895 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00452896_g1
Size
Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Smug1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_027885.3 NP_082161.2 3 - 4 395 103
GenBank mRNA AK004735.1 - 2 - 3 131 103
AK172510.1 - 2 - 3 128 103
BC050253.1 - 6 - 7 671 6467286 103
BC054071.1 - 6 - 7 671 103
BC062960.1 - 3 - 4 395 30612187 103

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500002310.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK004735.1,AK172510.1,BC050253.1,BC062960.1,NM_027885.3 transcripts.

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Detect Genomic DNA Mus musculus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smug1

Panther Classification:

Molecular Function -

DNA metabolism protein DNA glycosylase nucleic acid metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

DNA repair
base-excision repair
cellular response to DNA damage stimulus
metabolic process
nucleic acid phosphodiester bond hydrolysis
purine-specific mismatch base pair DNA N-glycosylase activity
oxidized base lesion DNA N-glycosylase activity
oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
DNA binding
single-stranded DNA binding
uracil DNA N-glycosylase activity
hydrolase activity
hydrolase activity, acting on glycosyl bonds
single-strand selective uracil DNA N-glycosylase activity
DNA N-glycosylase activity
DNA-3-methylbase glycosylase activity
nicotinamide riboside hydrolase activity
nicotinic acid riboside hydrolase activity
deoxyribonucleoside 5'-monophosphate N-glycosidase activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1500019143.mm.1 NM_027885.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1500019143.mm.1 NM_027885.3 Refseq
Affymetrix Mouse Clariom S Array PSR1500019143.mm.1 TC1500002310.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1500019138.mm.1 NM_027885.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1500019138.mm.1 NM_027885.3 Refseq
Affymetrix Mouse Clariom S Array PSR1500019138.mm.1 TC1500002310.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1500019145.mm.1 NM_027885.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1500019145.mm.1 NM_027885.3 Refseq
Affymetrix Mouse Clariom S Array PSR1500019145.mm.1 TC1500002310.mm.1 MTA TC

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