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See other UPF1 GE Assays ›
Gene Symbol:
Upf1
Gene Name:
UPF1 regulator of nonsense transcripts homolog (yeast)
Gene Aliases:
B430202H16Rik, NORF1, PNORF-1, Rent1, Upflp
Chromosome Location:
Chr.8: 70331522 - 70353999 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00453098_g1
Size
Availability Made To Order
Catalog # 4351372
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Upf1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001122829.1 NP_001116301.1 4 - 5 895 83
NM_030680.2 NP_109605.2 4 - 5 895 83
GenBank mRNA AF182947.1 - 5 - 6 884 83
AF322655.1 - 4 - 5 615 83
AK148196.1 - 5 - 6 872 83
AK200037.1 - 1 - 2 61 83
BC052149.1 - 4 - 5 833 6332288 83
BC056442.1 - 4 - 5 895 5702493 83

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0800002390.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Detect Genomic DNA Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Upf1

Gene Ontology Categories:

Function(s) Process(es)

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
nuclear-transcribed mRNA catabolic process
DNA replication
DNA repair
regulation of translational termination
dosage compensation by inactivation of X chromosome
histone mRNA catabolic process
nucleotide binding
DNA binding
chromatin binding
RNA binding
ATP-dependent RNA helicase activity
helicase activity
ATP binding
zinc ion binding
hydrolase activity
poly(A) RNA binding
metal ion binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0800018087.mm.1 NM_001122829.2 Refseq
Affymetrix Mouse Clariom S Array PSR0800018087.mm.1 NM_030680.3 Refseq
Affymetrix Mouse Clariom S Array PSR0800018087.mm.1 TC0800002390.mm.1 MTA TC

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