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See other SMARCA1 GE Assays ›
Gene Symbol:
Smarca1
Gene Name:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
Gene Aliases:
5730494M04Rik, Snf2l
Chromosome Location:
Chr.X: 47809370 - 47892931 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00474152_m1
Size
Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Smarca1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001290708.1 NP_001277637.1 8 - 9 1261 109
NM_053123.4 NP_444353.3 8 - 9 1261 109
GenBank mRNA AF325920.1 - 8 - 9 1268 109
AK030741.1 - 8 - 9 1228 109
AK032978.1 - 8 - 9 1229 109
AK052092.1 - 8 - 9 1217 109
BC016071.1 - 8 - 9 1238 109
BC057115.1 - 8 - 9 1261 6406330 109

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00002154.mm.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smarca1

Panther Classification:

Molecular Function -

DNA helicase

Gene Ontology Categories:

Function(s) Process(es)

DNA strand renaturation
chromatin remodeling
transcription, DNA-templated
regulation of transcription, DNA-templated
brain development
chromatin modification
neuron differentiation
ATP-dependent chromatin remodeling
positive regulation of transcription, DNA-templated
regulation of neural precursor cell proliferation
nucleotide binding
nucleic acid binding
DNA binding
chromatin binding
helicase activity
ATP binding
DNA-dependent ATPase activity
hydrolase activity
hydrolase activity, acting on acid anhydrides
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
ATPase activity
nucleosome binding
annealing helicase activity
nucleosome-dependent ATPase activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0X00013609.mm.1 NM_053123.4.1 Refseq
Affymetrix Mouse Clariom S Array PSR0X00013609.mm.1 NM_053123.4 Refseq
Affymetrix Mouse Clariom S Array PSR0X00013609.mm.1 TC0X00002154.mm.1 MTA TC

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