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See other PTCD1 GE Assays ›
Gene Symbol:
Ptcd1
Gene Name:
pentatricopeptide repeat domain 1
Gene Aliases:
1110069M14Rik
Chromosome Location:
Chr.5: 145147378 - 145167119 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00505235_m1
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Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Ptcd1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_133735.2 NP_598496.3 1 - 2 151 73
GenBank mRNA AK088764.1 - 1 - 2 70 73
AK143877.1 - 1 - 2 108 73
AK150514.1 - 1 - 2 108 73
AK151064.1 - 1 - 2 120 73
AK152077.1 - 1 - 2 120 73
AK153366.1 - 1 - 2 120 73
AK171484.1 - 1 - 2 106 73
AK172986.1 - 73 73
BC004766.1 - 1 - 2 69 3156304 73
BC083097.1 - 1 - 2 110 30459747 73

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500003590.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK088764.1,AK150514.1,AK171484.1,BC004766.1,BC083097.1,NM_133735.2 transcripts.

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Mus musculus 1700 Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ptcd1

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

tRNA processing
biological_process
molecular_function

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0500032938.mm.1 TC0500003590.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500032938.mm.1 NM_133735.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500032938.mm.1 NM_133735.2 Refseq
Affymetrix Mouse Clariom S Array PSR0500032941.mm.1 TC0500003590.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500032941.mm.1 NM_133735.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500032941.mm.1 NM_133735.2 Refseq
Affymetrix Mouse Clariom S Array PSR0500032942.mm.1 TC0500003590.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500032942.mm.1 NM_133735.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500032942.mm.1 NM_133735.2 Refseq
Affymetrix Mouse Clariom S Array PSR0500032943.mm.1 TC0500003590.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500032943.mm.1 NM_133735.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500032943.mm.1 NM_133735.2 Refseq
Affymetrix Mouse Clariom S Array PSR0500032937.mm.1 TC0500003590.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500032937.mm.1 NM_133735.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500032937.mm.1 NM_133735.2 Refseq
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 904724 - -

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