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See other BCDIN3D GE Assays ›
Gene Symbol:
Bcdin3d
Gene Name:
BCDIN3 domain containing
Gene Aliases:
4930556P03Rik, AV138748
Chromosome Location:
Chr.15: 99470084 - 99474730 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00512595_m1
Best Coverage
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Bcdin3d
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_029236.2 NP_083512.2 1 - 2 270 137
GenBank mRNA AK016154.1 - 1 - 2 272 137
BC016225.1 - 1 - 2 249 4486953 137
BY262678.1 - 1 - 2 271 137
CO427236.1 - 1 - 2 230 137

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500002213.mm.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Bcdin3d

Gene Ontology Categories:

Function(s) Process(es)

RNA methylation
miRNA metabolic process
methylation
negative regulation of pre-miRNA processing
rRNA (adenine-N6,N6-)-dimethyltransferase activity
protein C-terminal carboxyl O-methyltransferase activity
tRNA (guanine-N2-)-methyltransferase activity
methyltransferase activity
C-methyltransferase activity
N-methyltransferase activity
O-methyltransferase activity
S-methyltransferase activity
RNA methyltransferase activity
mRNA methyltransferase activity
tRNA methyltransferase activity
protein methyltransferase activity
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
rRNA methyltransferase activity
rRNA (uridine-2'-O-)-methyltransferase activity
rRNA (adenine-N6-)-methyltransferase activity
DNA-methyltransferase activity
tRNA (guanine-N1-)-methyltransferase activity
rRNA (cytosine-C5-)-methyltransferase activity
selenocysteine methyltransferase activity
arginine N-methyltransferase activity
protein-arginine N-methyltransferase activity
lysine N-methyltransferase activity
protein-lysine N-methyltransferase activity
tRNA (uracil) methyltransferase activity
tRNA (guanine) methyltransferase activity
tRNA (adenine) methyltransferase activity
tRNA (cytosine) methyltransferase activity
tRNA (cytosine-5-)-methyltransferase activity
tRNA (adenine-N1-)-methyltransferase activity
rRNA (adenine) methyltransferase activity
rRNA (cytosine) methyltransferase activity
rRNA (guanine) methyltransferase activity
rRNA (uridine) methyltransferase activity
transferase activity
protein C-terminal leucine carboxyl O-methyltransferase activity
1-phenanthrol methyltransferase activity
protein-arginine N5-methyltransferase activity
methylarsonite methyltransferase activity
dimethylarsinite methyltransferase activity
4,5-dihydroxybenzo(a)pyrene methyltransferase activity
1-hydroxypyrene methyltransferase activity
1-hydroxy-6-methoxypyrene methyltransferase activity
demethylmenaquinone methyltransferase activity
cobalt-precorrin-6B C5-methyltransferase activity
cobalt-precorrin-7 C15-methyltransferase activity
cobalt-precorrin-5B C1-methyltransferase activity
cobalt-precorrin-3 C17-methyltransferase activity
dimethylamine methyltransferase activity
hydroxyneurosporene-O-methyltransferase activity
tRNA (adenine-57, 58-N(1)-) methyltransferase activity
methylamine-specific methylcobalamin:coenzyme M methyltransferase activity
trimethylamine methyltransferase activity
methanol-specific methylcobalamin:coenzyme M methyltransferase activity
monomethylamine methyltransferase activity
P-methyltransferase activity
Se-methyltransferase activity
2-phytyl-1,4-naphthoquinone methyltransferase activity
tRNA (uracil-2'-O-)-methyltransferase activity
tRNA (cytosine-2'-O-)-methyltransferase activity
phosphomethylethanolamine N-methyltransferase activity
tRNA (cytosine-3-)-methyltransferase activity
rRNA (cytosine-2'-O-)-methyltransferase activity
rRNA (cytosine-N4-)-methyltransferase activity
trihydroxyferuloyl spermidine O-methyltransferase activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480393 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480361 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480359 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480363 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480364 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480392 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480360 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480394 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480390 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480391 - -
Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2086153 NM_029236.2 mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2086153 AK016154.1 mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2086153 BC016225.1 mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2086153 BC078455.1 mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2086153 BQ557755.1 mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M 842816 - -
Agilent SurePrint G3 Mouse CGH Microarray 1x1M 75371 - -
Agilent SurePrint G3 Mouse CGH Microarray 1x1M 831665 AB101294.1 genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M 831665 AB101295.1 genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M 831665 AB101296.1 genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M 831665 AK007360.1 genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M 831665 AK167697.1 genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M 831665 BC031771.1 genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M 831665 BC057210.1 genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M 831665 BC094445.1 genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M 831665 NM_026924.3 refseq_mrna_mouse_NM
Agilent SurePrint G3 Mouse CGH Microarray 1x1M 831665 NM_152947.2 refseq_mrna_mouse_NM
Agilent SurePrint G3 Mouse CGH Microarray 4x180K 144589 - -
Agilent Mouse Genome CGH Microarray 44K G4426B A_53_P149785 - -
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2086153 NM_029236.2 mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2086153 AK016154.1 mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2086153 BC016225.1 mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2086153 BC078455.1 mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2086153 BQ557755.1 mouse_transcriptome
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480399 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480391 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480381 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480396 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480387 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480389 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480384 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480411 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480376 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480405 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480410 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480386 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480402 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480393 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480403 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480377 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480408 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480382 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480397 - -
Agilent Mouse Promoter ChIP-on-Chip A) A_68_P30480379 - -
Agilent Mouse Genome CGH Microarray 244A (G4415A) A_53_P149785 - -
Whole Mouse Genome G4122A A_51_P360896 NM_029236.2 mouse_transcriptome
Whole Mouse Genome G4122A A_51_P360896 AK016154.1 mouse_transcriptome
Whole Mouse Genome G4122A A_51_P360896 BC016225.1 mouse_transcriptome
Whole Mouse Genome G4122A A_51_P360896 BC078455.1 mouse_transcriptome
Whole Mouse Genome G4122A A_51_P360896 BQ557755.1 mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P108136 - -
Agilent Mouse Genome CGH Microarray 105A (G4416A) A_53_P149785 - -
Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P12047237 - -
Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P12047231 - -
Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P12231912 - -
Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P12047229 - -
Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P12047225 - -
Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P12268896 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480390 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480360 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480391 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480364 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480393 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480394 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480361 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480363 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480392 - -
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P30480359 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480325 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480303 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480344 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480391 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480393 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480397 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480386 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480368 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480364 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480373 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480339 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480420 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480387 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480411 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480389 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480343 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480357 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480360 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480375 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480396 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480421 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480306 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480350 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480340 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480356 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480402 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480304 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480353 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480354 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480313 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480347 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480384 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480381 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480321 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480315 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480307 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480403 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480399 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480408 - -
Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30480370 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480389 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480399 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480387 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480357 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480368 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480381 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P11871559 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P12078379 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P12355335 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480408 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480370 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P12047225 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P11961262 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480415 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480346 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480338 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P11961473 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480344 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480340 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480347 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P12268896 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480376 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P11945131 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480339 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P12047235 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480373 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480360 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480403 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480375 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480396 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480414 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P11838853 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480406 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480402 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480386 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480343 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480349 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480364 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480353 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P11945133 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480416 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480397 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480410 - -
Agilent Six_ChIP_03_of_03_v2 A_68_P30480413 - -
Array Name Probe IDs Targets Target Type
Affymetrix Mouse Gene 1.0 ST Array 10432489 - -
Affymetrix Mouse Gene 1.0 ST Array 10432490 - -
Affymetrix Mouse Gene 1.0 ST Array 10432491 - -
Affymetrix HT MG-430 PM Array Plate 1451491_PM_at - -
Affymetrix Mouse Gene 1.1 ST Array 10432488 - -
Mouse Genome 430 2.0 Array 1451491_at - -
Mouse Genome 430 2.0 Array 1451491_PM_at - -
Affymetrix GeneChip Mouse Genome 430 2.0 Array 75284_PM_at - -
Affymetrix GeneChip Mouse Genome 430 2.0 Array 75284_at - -
Affymetrix Mouse Clariom S Array PSR1500018125.mm.1 NM_029236.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1500018125.mm.1 NM_029236.2 Refseq
Affymetrix Mouse Clariom S Array PSR1500018125.mm.1 TC1500002213.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1500018123.mm.1 NM_029236.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1500018123.mm.1 NM_029236.2 Refseq
Affymetrix Mouse Clariom S Array PSR1500018123.mm.1 TC1500002213.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1500018124.mm.1 NM_029236.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1500018124.mm.1 NM_029236.2 Refseq
Affymetrix Mouse Clariom S Array PSR1500018124.mm.1 TC1500002213.mm.1 MTA TC
Mouse Expression Set 430 1451491_at - -
Mouse Expression Set 430 1451491_PM_at - -
Mouse Genome 430A 2.0 Array 1451491_PM_at - -
Mouse Genome 430A 2.0 Array 1451491_at - -
Affymetrix HT Mouse Genome 430A Array 1451491_PM_at - -
Affymetrix HT Mouse Genome 430A Array 1451491_at - -
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 383146 - -
Array Name Probe IDs Targets Target Type
MouseWG-6 v2 Expression BeadChip 770022 - -
Illumina mouse-6 v1.0 expression beadchip 770022 - -
Illumina mouseRef-8 v1.0 expression beadchip 0000770022 - -
Illumina mouseRef-8 v1.1 expression beadchip ILMN_2736925 - -
Illumina mouse-6 v1.1 expression beadchip ILMN_2736925 - -
mouse-6 v1.1 (Illumina) scl46737.2_168-S - -
Illumina Sentrix mouse-6.v1 bead array 770022 - -
Illumina Sentrix MouseRef-8 Expression BeadChip scl46737.2_168-S - -
Illumina Sentrix Mouse-6 Expression BeadChip (2) 770022 - -
MouseRef-8 v2 Expression BeadChip ILMN_2736925 - -
Illumina MouseWG-6 v2.0 expression beadchip ILMN_2736925 - -

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Host server : magellan-search-green-659f68c6f4-5jw8n:80/100.66.79.31:80.
git-commit: 208ebf2ce40f07c29af7b8d1bec64c518c8c0cf8
git-url: https://github.com/thermofisher/magellan-search
git-branch: release/2.43.0-2026.01.05-1.0