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See other HDAC3 GE Assays ›
Gene Symbol:
Hdac3
Gene Name:
histone deacetylase 3
Gene Aliases:
AW537363
Chromosome Location:
Chr.18: 37936971 - 37955000 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00515909_g1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Hdac3
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_010411.2 NP_034541.2 1 - 2 137 58
GenBank mRNA AF074881.1 - 1 - 2 84 58
AF074882.1 - 1 - 2 84 58
AF098295.1 - 1 - 2 62 58
AF125536.1 - 1 - 2 69 58
AK145158.1 - 1 - 2 103 58
BC139300.1 - 1 - 2 165 8862322 58
BC139301.1 - 1 - 2 165 8862323 58
BQ932476.1 - 1 - 2 149 58
CJ166955.1 - 1 - 2 140 58
JN651901.1 - 1 - 2 67 58
JN651902.1 - 1 - 2 67 58
JN651903.1 - 1 - 2 67 58
JN651904.1 - 1 - 2 67 58

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1800001220.mm.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Detect Genomic DNA Mus musculus 1700 Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hdac3

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
positive regulation of protein phosphorylation
transcription, DNA-templated
regulation of transcription, DNA-templated
protein deacetylation
regulation of mitotic cell cycle
chromatin modification
histone deacetylation
regulation of protein stability
positive regulation of TOR signaling
negative regulation of interleukin-1 production
negative regulation of tumor necrosis factor production
circadian regulation of gene expression
regulation of multicellular organism growth
positive regulation of transcription factor import into nucleus
negative regulation of sequence-specific DNA binding transcription factor activity
positive regulation of neuron apoptotic process
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
negative regulation of JNK cascade
negative regulation of protein export from nucleus
spindle assembly
cellular response to fluid shear stress
positive regulation of type B pancreatic cell apoptotic process
negative regulation of cardiac muscle cell differentiation
DNA binding
chromatin binding
transcription corepressor activity
histone deacetylase activity
protein binding
transcription factor binding
hydrolase activity
enzyme binding
cyclin binding
histone deacetylase activity (H3-K14 specific)
chromatin DNA binding
NAD-dependent histone deacetylase activity (H3-K14 specific)
histone deacetylase activity (H3-K9 specific)
protein deacetylase activity
histone deacetylase activity (H4-K16 specific)
histone deacetylase binding
NAD-dependent histone deacetylase activity (H3-K9 specific)
NAD-dependent histone deacetylase activity (H4-K16 specific)
GTPase binding
NF-kappaB binding
NAD-dependent histone deacetylase activity (H3-K18 specific)

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1800008996.mm.1 NM_010411.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1800008996.mm.1 NM_010411.2 Refseq
Affymetrix Mouse Clariom S Array PSR1800008996.mm.1 TC1800001220.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1800009000.mm.1 NM_010411.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1800009000.mm.1 NM_010411.2 Refseq
Affymetrix Mouse Clariom S Array PSR1800009000.mm.1 TC1800001220.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1800009001.mm.1 TC1800001220.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1800008998.mm.1 NM_010411.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1800008998.mm.1 NM_010411.2 Refseq
Affymetrix Mouse Clariom S Array PSR1800008998.mm.1 TC1800001220.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1800008999.mm.1 NM_010411.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1800008999.mm.1 NM_010411.2 Refseq
Affymetrix Mouse Clariom S Array PSR1800008999.mm.1 TC1800001220.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 909225 - -

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