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  • › Mm00547103_m1
See other SMURF1 GE Assays ›
Gene Symbol:
Smurf1
Gene Name:
SMAD specific E3 ubiquitin protein ligase 1
Gene Aliases:
4930431E10Rik, mKIAA1625
Chromosome Location:
Chr.5: 144876495 - 144965830 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00547103_m1
Size
Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Smurf1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001038627.1 NP_001033716.1 12 - 13 1650 72
NM_029438.3 NP_083714.3 12 - 13 1650 72
GenBank mRNA AK015264.1 - 8 - 9 1049 72
AK034736.1 - 3 - 4 248 72
AK154491.1 - 12 - 13 1651 72
BC029097.1 - 12 - 13 3660965 72
CB527254.1 - 4 - 5 574 72

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500003585.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smurf1

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)

protein polyubiquitination
positive regulation of defense response to virus by host
protein export from nucleus
transforming growth factor beta receptor signaling pathway
protein ubiquitination
cell differentiation
negative regulation of ossification
BMP signaling pathway
negative regulation of transforming growth factor beta receptor signaling pathway
ubiquitin-dependent SMAD protein catabolic process
receptor catabolic process
protein localization to cell surface
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
proteasome-mediated ubiquitin-dependent protein catabolic process
protein targeting to vacuole involved in autophagy
mitophagy in response to mitochondrial depolarization
positive regulation of dendrite extension
positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
ubiquitin-protein transferase activity
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
ubiquitin protein ligase activity
I-SMAD binding
R-SMAD binding
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0500032857.mm.1 TC0500003585.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500032857.mm.1 NM_001038627.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500032857.mm.1 NM_001038627.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500032857.mm.1 NM_029438.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500032857.mm.1 NM_029438.3 Refseq

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