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See other SMARCB1 GE Assays ›
Gene Symbol:
Smarcb1
Gene Name:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Gene Aliases:
AU020204, Baf47, Ini1, SNF5/INI1, Snf5
Chromosome Location:
Chr.10: 75896769 - 75921614 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01149629_m1
Size
Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Smarcb1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001161853.1 NP_001155325.1 5 - 6 822 105
NM_011418.2 NP_035548.1 5 - 6 849 105
GenBank mRNA AB017343.1 - 5 - 7 630 105
AB017344.1 - 5 - 7 603 105
AB041578.1 - 5 - 6 804 105
AJ011739.1 - 5 - 6 823 105
AJ011740.1 - 5 - 6 823 105
AK008558.1 - 3 - 4 554 105
AK075906.1 - 5 - 6 832 105
AK145552.1 - 5 - 6 811 105
AK147638.1 - 2 - 3 5183 105
AK147685.1 - 2 - 3 5183 105
AK150169.1 - 5 - 6 823 105
AK181638.1 - 2 - 3 168 105
BC025163.1 - 5 - 6 803 3154501 105
BC035269.1 - 3 - 4 2951 105

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1000002391.mm.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Mus musculus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smarcb1

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

blastocyst development
blastocyst hatching
DNA repair
nucleosome disassembly
chromatin remodeling
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
cell cycle
nervous system development
negative regulation of cell proliferation
chromatin modification
cell differentiation
single stranded viral RNA replication via double stranded DNA intermediate
ATP-dependent chromatin remodeling
positive regulation by host of viral transcription
mitotic cell cycle phase transition
positive regulation of transcription from RNA polymerase II promoter
positive regulation of sequence-specific DNA binding transcription factor activity
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
p53 binding
transcription coactivator activity
protein binding
Tat protein binding
nucleosomal DNA binding

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1000017108.mm.1 NM_001161853.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000017108.mm.1 NM_001161853.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000017108.mm.1 NM_011418.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000017108.mm.1 NM_011418.2 Refseq
Affymetrix Mouse Clariom S Array PSR1000017108.mm.1 TC1000002391.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1000017106.mm.1 NM_001161853.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000017106.mm.1 NM_001161853.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000017106.mm.1 NM_011418.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000017106.mm.1 NM_011418.2 Refseq
Affymetrix Mouse Clariom S Array PSR1000017106.mm.1 TC1000002391.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 889629 - -

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