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  • › Mm01202356_m1
See other CHFR GE Assays ›
Gene Symbol:
Chfr
Gene Name:
checkpoint with forkhead and ring finger domains
Gene Aliases:
5730484M20Rik, C230082M18, RNF116
Chromosome Location:
Chr.5: 110135759 - 110171973 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01202356_m1
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Chfr
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001289577.1 NP_001276506.1 8 - 9 1063 66
NM_001289578.1 NP_001276507.1 7 - 8 847 66
NM_001289579.1 NP_001276508.1 9 - 10 1136 66
NM_001289580.1 NP_001276509.1 9 - 10 1233 66
NM_172717.4 NP_766305.2 8 - 9 1063 66
GenBank mRNA AK077629.1 - 8 - 9 1035 66
AK147892.1 - 7 - 8 822 66
AK148436.1 - 8 - 9 1034 66
AK154038.1 - 8 - 9 1045 66
AK169182.1 - 9 - 10 1089 66
AK169193.1 - 8 - 9 1018 66
BC049792.1 - 8 - 9 1017 6510480 66

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500001132.mm.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Chfr

Panther Classification:

Molecular Function -

ubiquitin-protein ligase protein modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)

protein polyubiquitination
mitotic cell cycle
ubiquitin-dependent protein catabolic process
cell cycle
mitotic nuclear division
mitotic cell cycle checkpoint
protein ubiquitination
modification-dependent protein catabolic process
positive regulation of protein ubiquitination
protein destabilization
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
cell division
nucleotide binding
ubiquitin-protein transferase activity
protein binding
zinc ion binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
metal ion binding
ubiquitin protein ligase activity
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0500009657.mm.1 TC0500001132.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500009657.mm.1 NM_001289577.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500009657.mm.1 NM_001289578.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500009657.mm.1 NM_001289579.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500009657.mm.1 NM_001289580.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500009657.mm.1 NM_172717.4 Refseq

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