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See other DNMT3B GE Assays ›
Gene Symbol:
Dnmt3b
Gene Name:
DNA methyltransferase 3B
Gene Aliases:
MmuIIIB
Chromosome Location:
Chr.2: 153649165 - 153687730 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01240113_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Dnmt3b
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001003960.4 NP_001003960.2 19 - 20 2518 83
NM_001003961.4 NP_001003961.2 20 - 21 2578 83
NM_001003963.4 NP_001003963.2 20 - 21 2578 83
NM_001122997.2 NP_001116469.1 19 - 20 2466 83
NM_001271744.1 NP_001258673.1 19 - 20 2463 83
NM_001271745.1 NP_001258674.1 18 - 19 2403 83
NM_001271746.1 NP_001258675.1 19 - 20 2463 83
NM_001271747.1 NP_001258676.1 18 - 19 2403 83
NM_010068.5 NP_034198.3 19 - 20 2518 83
GenBank mRNA AF068626.2 - 20 - 21 2433 83
AF068627.2 - 19 - 20 2373 83
AF068628.2 - 19 - 20 2373 83
AF151969.1 - 20 - 21 2576 83
AF151970.1 - 19 - 20 2516 83
AF151971.1 - 19 - 20 2516 83
AF151972.1 - 20 - 21 2576 83
AF151973.1 - 19 - 20 2461 83
AF151974.1 - 18 - 19 2401 83
AF151975.1 - 19 - 20 2461 83
AF151976.1 - 18 - 19 2401 83
AY078427.1 - 20 - 21 2433 83
BC105677.1 - 19 - 20 2298 40048574 83
BC105922.1 - 19 - 20 2298 40048584 83

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200002318.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Mus musculus Mouse Stem Cell Pluripotency Inventoried Mouse_Stem_Cell Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Dnmt3b

Panther Classification:

Molecular Function -

DNA methyltransferase

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA methylation
methylation-dependent chromatin silencing
regulation of gene expression by genetic imprinting
DNA methylation on cytosine within a CG sequence
positive regulation of gene expression
protein complex localization
methylation
positive regulation of neuron differentiation
negative regulation of gene expression, epigenetic
negative regulation of transcription, DNA-templated
S-adenosylhomocysteine metabolic process
S-adenosylmethioninamine metabolic process
positive regulation of histone H3-K4 methylation
negative regulation of histone H3-K9 methylation
inactivation of X chromosome by DNA methylation
cellular response to amino acid stimulus
C-5 methylation of cytosine
DNA binding
chromatin binding
transcription corepressor activity
DNA (cytosine-5-)-methyltransferase activity
protein binding
methyltransferase activity
transferase activity
histone deacetylase binding
unmethylated CpG binding
metal ion binding
DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0200018258.mm.1 NM_001003960.4 Refseq
Affymetrix Mouse Clariom S Array PSR0200018258.mm.1 NM_001003961.4 Refseq
Affymetrix Mouse Clariom S Array PSR0200018258.mm.1 NM_001003963.4 Refseq
Affymetrix Mouse Clariom S Array PSR0200018258.mm.1 NM_001122997.2 Refseq
Affymetrix Mouse Clariom S Array PSR0200018258.mm.1 NM_001271744.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200018258.mm.1 NM_001271745.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200018258.mm.1 NM_001271746.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200018258.mm.1 NM_001271747.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200018258.mm.1 NM_010068.5 Refseq
Affymetrix Mouse Clariom S Array PSR0200018258.mm.1 TC0200002318.mm.1 MTA TC

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