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See other TARDBP GE Assays ›
Gene Symbol:
Tardbp
Gene Name:
TAR DNA binding protein
Gene Aliases:
1190002A23Rik, C85084, TDP-43, Tdp43
Chromosome Location:
Chr.4: 148612382 - 148626996 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01257504_g1
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tardbp
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001003898.3 NP_001003898.1 4 - 5 872 77
NM_001003899.2 NP_001003899.1 4 - 5 872 77
NM_001008545.2 NP_001008545.1 4 - 5 872 77
NM_001008546.2 NP_001008546.1 4 - 5 872 77
NM_145556.4 NP_663531.1 4 - 5 872 77
NR_027864.1 4 - 5 872 77
GenBank mRNA AK032199.1 - 4 - 5 642 77
AK045495.1 - 4 - 5 642 77
AK083312.1 - 4 - 5 646 77
AK133207.1 - 4 - 5 649 77
AK146002.1 - 4 - 5 642 77
AK146997.1 - 5 - 6 551 77
AK153803.1 - 4 - 5 646 77
AY319513.1 - 3 - 4 542 77
AY319514.1 - 3 - 4 542 77
AY319515.1 - 3 - 4 542 77
AY319516.1 - 3 - 4 542 77
BC012873.1 - 4 - 5 630 4016437 77
BC025544.1 - 4 - 5 643 5321007 77
BC027105.1 - 4 - 5 634 5359082 77
BC027772.1 - 4 - 5 632 5346061 77
BC029728.1 - 4 - 5 633 4950263 77
BC031126.1 - 4 - 5 634 4977114 77
BC033475.1 - 4 - 5 630 4953334 77
GQ428775.1 - 3 - 4 542 77
GQ428776.1 - 3 - 4 542 77
GQ428777.1 - 3 - 4 542 77

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Detect Genomic DNA Recommended Assay Mus musculus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tardbp

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of protein phosphorylation
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
mRNA processing
RNA splicing
negative regulation of gene expression
nuclear fragmentation involved in apoptotic nuclear change
negative regulation by host of viral transcription
positive regulation of transcription from RNA polymerase II promoter
regulation of cell cycle
3'-UTR-mediated mRNA stabilization
nuclear inner membrane organization
nucleotide binding
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding
nucleic acid binding
DNA binding
double-stranded DNA binding
RNA binding
mRNA 3'-UTR binding
protein binding
identical protein binding
poly(A) RNA binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 TC0400004026.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 NM_001003898.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 NM_001003898.3 Refseq
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 NM_001003899.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 NM_001003899.2 Refseq
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 NM_001008545.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 NM_001008545.2 Refseq
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 NM_001008546.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 NM_001008546.2 Refseq
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 NM_145556.4.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 NM_145556.4 Refseq
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 NR_027864.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400033329.mm.1 NR_027864.1 Refseq

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