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See other ATG4C GE Assays ›
Gene Symbol:
Atg4c
Gene Name:
autophagy related 4C, cysteine peptidase
Gene Aliases:
Apg4-C, Apg4c, Atg4cl, Autl1
Chromosome Location:
Chr.4: 99190891 - 99297258 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01259885_m1
Size
Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Atg4c
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001145967.1 NP_001139439.1 7 - 8 1127 80
NM_175029.3 NP_778194.3 7 - 8 1509 80
GenBank mRNA AK134838.1 - 7 - 8 1276 80
AK156463.1 - 7 - 8 1279 80
BC058981.1 - 7 - 8 1509 6827140 80

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0400000996.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atg4c

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Function(s) Process(es)

autophagosome assembly
mitophagy
C-terminal protein lipidation
proteolysis
protein targeting to membrane
transport
autophagy
cellular response to nitrogen starvation
protein transport
protein processing
nucleophagy
protein delipidation
cysteine-type endopeptidase activity
peptidase activity
cysteine-type peptidase activity
hydrolase activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0400006728.mm.1 NM_001145967.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400006728.mm.1 NM_001145967.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400006728.mm.1 NM_175029.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400006728.mm.1 NM_175029.3 Refseq
Affymetrix Mouse Clariom S Array PSR0400006728.mm.1 TC0400000996.mm.1 MTA TC

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