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  • › Mm01746176_g1
See other TDG GE Assays ›
Gene Symbol:
Tdg
Gene Name:
thymine DNA glycosylase
Gene Aliases:
E130317C12Rik, JZA-3, Jza1
Chromosome Location:
Chr.10: 82629247 - 82650494 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01746176_g1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tdg
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_172552.3 NP_766140.2 1 135 134
GenBank mRNA BC085471.1 - 1 106 6816716 134

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More Information


Additional Information:

This assay is in the 5'UTR region of the BC085471.1, NM_172552.3 transcripts.

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Detect Genomic DNA Mus musculus Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tdg

Panther Classification:

Molecular Function -

DNA metabolism protein DNA glycosylase nucleic acid metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA repair
base-excision repair
mismatch repair
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
cellular response to DNA damage stimulus
metabolic process
embryo development
chromatin modification
negative regulation of protein binding
negative regulation of chromatin binding
regulation of gene expression, epigenetic
DNA demethylation
RNA polymerase II transcription cofactor activity
double-stranded DNA binding
protein kinase C binding
protein binding
transcription factor binding
pyrimidine-specific mismatch base pair DNA N-glycosylase activity
hydrolase activity
hydrolase activity, acting on glycosyl bonds
hydrolase activity, hydrolyzing N-glycosyl compounds
DNA N-glycosylase activity
protein domain specific binding
mismatched DNA binding
SUMO binding
protein homodimerization activity
structure-specific DNA binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1000007378.mm.1 NM_011561.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007378.mm.1 NM_011561.2 Refseq
Affymetrix Mouse Clariom S Array PSR1000007378.mm.1 NM_172552.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007378.mm.1 NM_172552.3 Refseq
Affymetrix Mouse Clariom S Array PSR1000007378.mm.1 NR_037190.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007378.mm.1 TC1000000928.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1000007382.mm.1 NM_011561.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007382.mm.1 NM_011561.2 Refseq
Affymetrix Mouse Clariom S Array PSR1000007382.mm.1 NM_172552.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007382.mm.1 NM_172552.3 Refseq
Affymetrix Mouse Clariom S Array PSR1000007382.mm.1 NR_037190.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007382.mm.1 TC1000000928.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1000007380.mm.1 NM_172552.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007380.mm.1 NM_172552.3 Refseq
Affymetrix Mouse Clariom S Array PSR1000007380.mm.1 TC1000000928.mm.1 MTA TC

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