Assay Details

Gene Symbol: Atxn1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001199304.1	NP_001186233.1	7	7432		71
	NM_001199305.1	NP_001186234.1	8	7581		71
	NM_009124.6	NP_033150.2	8	7557		71
GenBank mRNA	AA435241.1	-	1	183		71
	AI642908.1	-	1	188		71
	AK019314.1	-	1	346		71
	AK135987.1	-	1	1851		71

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BY712500.1	-	1	346		Chr. 13 - 45552673 - 45553124 [-] on Build GRCm38	71
GenBankmRNA	CB237212.1	-		242		Chr. - - [-] on Build	71

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	guanosine monophosphate reductase	Gmpr	2310004P21Rik, AV028449	-6.3kb	Anti-sense	Chr. 13 - 45507429 - 45546386 on NCBI Build GRCm38
Downstream	RIKEN cDNA 5033430I15 gene	5033430I15Rik		411.9kb	Anti-sense	Chr. 13 - 45965060 - 45966508 on NCBI Build GRCm38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Mus musculus

1700

Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atxn1

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1300011841.mm.1	NM_001199304.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011841.mm.1	NM_001199304.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011841.mm.1	NM_001199305.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011841.mm.1	NM_001199305.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011841.mm.1	NM_009124.6.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011841.mm.1	NM_009124.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011841.mm.1	TC1300001911.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300011843.mm.1	NM_001199304.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011843.mm.1	NM_001199304.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011843.mm.1	NM_001199305.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011843.mm.1	NM_001199305.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011843.mm.1	NM_009124.6.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011843.mm.1	NM_009124.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011843.mm.1	TC1300001911.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300011842.mm.1	NM_001199304.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011842.mm.1	NM_001199304.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011842.mm.1	NM_001199305.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011842.mm.1	NM_001199305.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011842.mm.1	NM_009124.6.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011842.mm.1	NM_009124.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011842.mm.1	TC1300001911.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300011845.mm.1	NM_001199304.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011845.mm.1	NM_001199304.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011845.mm.1	NM_001199305.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011845.mm.1	NM_001199305.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011845.mm.1	NM_009124.6.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011845.mm.1	NM_009124.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011845.mm.1	TC1300001911.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300011844.mm.1	NM_001199304.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011844.mm.1	NM_001199304.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011844.mm.1	NM_001199305.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011844.mm.1	NM_001199305.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011844.mm.1	NM_009124.6.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011844.mm.1	NM_009124.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1300011844.mm.1	TC1300001911.mm.1	MTA TC

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Genomic Map