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See other DDIT3 GE Assays ›
Gene Symbol:
Ddit3
Gene Name:
DNA-damage inducible transcript 3
Gene Aliases:
CHOP, CHOP-10, Chop10, Gadd153
Chromosome Location:
Chr.7: 70578545 - 70585074 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00492098_g1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Ddit3
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001109986.1 NP_001103456.1 3 - 4 305 92
NM_024134.2 NP_077048.2 2 - 3 257 92
XM_006241444.2 XP_006241506.1 4 - 5 1483 92
XM_006241445.2 XP_006241507.1 3 - 4 1435 92
GenBank mRNA AW916370.1 - 3 - 4 305 92
BC100664.1 - 3 - 4 268 7932840 92
BF282473.1 - 1 - 2 92
CF977695.1 - 2 - 3 260 92
U30186.1 - 2 - 3 249 92
U36994.1 - 2 - 3 227 92

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700000893.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ddit3

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
blood vessel maturation
response to amphetamine
transcription, DNA-templated
regulation of transcription, DNA-templated
apoptotic process
response to oxidative stress
ER overload response
response to unfolded protein
cell cycle arrest
aging
response to nutrient
Wnt signaling pathway
endoplasmic reticulum unfolded protein response
positive regulation of interleukin-8 production
negative regulation of CREB transcription factor activity
response to endoplasmic reticulum stress
response to drug
response to hydrogen peroxide
response to starvation
mRNA transcription from RNA polymerase II promoter
positive regulation of apoptotic process
proteasome-mediated ubiquitin-dependent protein catabolic process
negative regulation of DNA binding
negative regulation of sequence-specific DNA binding transcription factor activity
positive regulation of neuron apoptotic process
regulation of transcription involved in anterior/posterior axis specification
cell redox homeostasis
negative regulation of fat cell differentiation
negative regulation of myoblast differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
embryonic organ development
release of sequestered calcium ion into cytosol
negative regulation of protein kinase B signaling
intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
negative regulation of canonical Wnt signaling pathway
negative regulation of RNA polymerase II regulatory region sequence-specific DNA binding
positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
negative regulation of determination of dorsal identity
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II transcription factor binding
DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
transcription factor binding
protein homodimerization activity
leucine zipper domain binding
sequence-specific DNA binding
protein heterodimerization activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P059495 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 455129 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 460327 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 178694 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 808759 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P059495 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P059495 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P059495 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P445344 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700180249 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 39750 - -
Agilent Rat cDNA Microarray (G4105A) 700180249 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10895864 - -
Affymetrix Rat Gene 1.0 ST Array 10895862 - -
Affymetrix Rat Gene 1.0 ST Array 10895865 - -
Affymetrix Rat Gene 1.0 ST Array 10895863 - -
Affymetrix Rat Gene 1.1 ST Array 10895861 - -
Rat Genome 230 2.0 Array 1369590_PM_a_at - -
Rat Genome 230 2.0 Array 1369590_a_at - -
Affymetrix HT Rat Focus Array 1369590_PM_a_at - -
Affymetrix HT Rat Focus Array 1369590_a_at - -
Affymetrix Rat Clariom S Assay PSR0700006739.rn.1 TC0700000893.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0700006738.rn.1 TC0700000893.rn.1 RTA TC
Rat Expression Set 230 1369590_a_at - -
Rat Expression Set 230 1369590_PM_a_at - -
Affymetrix Rat Gene 1.0 ST Array 10895861 - -
Rat Genome U34 Set U30186_at - -
Rat Genome U34 Set AA686470_i_at - -
Rat Genome U34 Set AA686470_s_at - -
Rat Genome U34 Set U30186_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21564969 - -
ABI Rat Genome Survey Microarray 21924040 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1349910 - -
RatRef-12 Expression BeadChip ILMN_69830 - -

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