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See other GFI1 GE Assays ›
Gene Symbol:
Gfi1
Gene Name:
growth factor independent 1 transcription repressor
Gene Aliases:
-
Chromosome Location:
Chr.14: 3058035 - 3072566 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00561271_m1
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Gfi1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_012566.1 NP_036698.1 3 - 4 366 75
XM_008769917.1 XP_008768139.1 3 - 4 607 75
XM_008769918.1 XP_008768140.1 3 - 4 442 75
XM_008769919.1 XP_008768141.1 3 - 4 1324 75
XM_008769920.1 XP_008768142.1 3 - 4 1324 75
GenBank mRNA L06986.1 - 3 - 4 366 75

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400000055.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Gfi1

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
mechanosensory behavior
negative regulation of cell fate specification
negative regulation of calcidiol 1-monooxygenase activity
negative regulation of neuron projection development
negative regulation of NF-kappaB transcription factor activity
regulation of toll-like receptor signaling pathway
inner ear morphogenesis
auditory receptor cell differentiation
positive regulation of cell fate specification
cell fate commitment
negative regulation of transcription, DNA-templated
positive regulation of interleukin-6-mediated signaling pathway
cellular response to lipopolysaccharide
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
protein binding
zinc ion binding
transcription regulatory region DNA binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P262078 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 591487 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 118092 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 752066 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 282745 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 720201 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 36090 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 49831 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P262078 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P262078 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P262078 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P262078 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 49529 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 2361 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10771045 - -
Affymetrix Rat Gene 1.0 ST Array 10771043 - -
Affymetrix Rat Gene 1.0 ST Array 10771044 - -
Affymetrix Rat Gene 1.0 ST Array 10771047 - -
Affymetrix Rat Gene 1.0 ST Array 10771048 - -
Affymetrix Rat Gene 1.0 ST Array 10771046 - -
Affymetrix Rat Gene 1.1 ST Array 10771042 - -
Rat Genome 230 2.0 Array 1380421_s_at - -
Rat Genome 230 2.0 Array 1380421_PM_s_at - -
Rat Genome 230 2.0 Array 1369411_at - -
Rat Genome 230 2.0 Array 1369411_PM_at - -
Affymetrix HT Rat Focus Array 1369411_at - -
Affymetrix HT Rat Focus Array 1369411_PM_at - -
Affymetrix HT Rat Focus Array 1380421_PM_s_at - -
Affymetrix HT Rat Focus Array 1380421_s_at - -
Affymetrix Rat Clariom S Assay PSR1400000425.rn.1 TC1400000055.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1400000424.rn.1 TC1400000055.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1400000426.rn.1 TC1400000055.rn.1 RTA TC
Rat Expression Set 230 1369411_at - -
Rat Expression Set 230 1369411_PM_at - -
Rat Expression Set 230 1380421_s_at - -
Rat Expression Set 230 1380421_PM_s_at - -
Affymetrix Rat Gene 1.0 ST Array 10771042 - -
Rat Genome U34 Set L06986_at - -
Rat Genome U34 Set L06986_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21729636 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1374307 - -
RatRef-12 Expression BeadChip ILMN_57183 - -

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