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See other ATF3 GE Assays ›
Gene Symbol:
Atf3
Gene Name:
activating transcription factor 3
Gene Aliases:
LRF-1, LRFI
Chromosome Location:
Chr.13: 109817892 - 109849632 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00563784_m1
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information
  • Citations (2)

Genomic Map

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Assay Details

Gene Symbol: Atf3
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_012912.2 NP_037044.1 3 - 4 510 88
GenBank mRNA BC078903.1 - 3 - 4 510 7100767 88
M63282.1 - 3 - 4 515 88

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300002212.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atf3

Panther Classification:

Molecular Function -

basic leucine zipper transcription factor

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
cell fate determination
gluconeogenesis
transcription, DNA-templated
transcription from RNA polymerase II promoter
positive regulation of cell proliferation
skeletal muscle cell differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
RNA polymerase II regulatory region sequence-specific DNA binding
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
identical protein binding
protein homodimerization activity
transcription regulatory region DNA binding
protein heterodimerization activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P11616 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 356132 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 500034 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 927796 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 193576 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 635300 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 825391 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 281349 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 626168 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 48326 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 152115 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 38221 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P11616 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P11616 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P11616 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P11616 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 22783 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 73786 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10770713 - -
Affymetrix Rat Gene 1.0 ST Array 10770712 - -
Affymetrix Rat Gene 1.0 ST Array 10770711 - -
Affymetrix Rat Gene 1.1 ST Array 10770710 - -
Rat Genome 230 2.0 Array 1369268_PM_at - -
Rat Genome 230 2.0 Array 1369268_at - -
Affymetrix HT Rat Focus Array 1369268_at - -
Affymetrix HT Rat Focus Array 1369268_PM_at - -
Affymetrix Rat Clariom S Assay PSR1300015757.rn.1 TC1300002212.rn.1 RTA TC
Rat Expression Set 230 1369268_at - -
Rat Expression Set 230 1369268_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10770710 - -
Rat Genome U34 Set M63282_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21030397 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1363083 - -
RatRef-12 Expression BeadChip ILMN_55728 - -

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Citations (2)

SOCS3-mediated blockade of JAK/STAT3 signaling pathway reveals its major contribution to spinal cord neuroinflammation and mechanical allodynia after peripheral nerve injury.
Authors
Dominguez E, Mauborgne A, Mallet J, Desclaux M, Pohl M
Journal
J Neurosci - Page No 5754 (Wed Apr 21 00:00:00 EDT 2010)
Volume (Year)
30 (2010)
Product Usage
-
Differential implication of proinflammatory cytokine interleukin-6 in the development of cephalic versus extracephalic neuropathic pain in rats.
Authors
Latremoliere A, Mauborgne A, Masson J, Bourgoin S, Kayser V, Hamon M, Pohl M
Journal
J Neurosci - Page No 8489 (Wed Aug 20 00:00:00 EDT 2008)
Volume (Year)
28 (2008)
Product Usage
-

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