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See other GJA5 GE Assays ›
Gene Symbol:
Gja5
Gene Name:
gap junction protein, alpha 5
Gene Aliases:
Cx40
Chromosome Location:
Chr.2: 199162745 - 199184942 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00570632_m1
Size
Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Gja5
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_019280.1 NP_062153.1 1 - 2 60 83
GenBank mRNA AF021806.1 - 1 - 2 60 83
BC070935.1 - 1 - 2 82 7097997 83

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More Information


Additional Information:

This assay is in the 5'UTR region of the AF021806.1, BC070935.1, NM_019280.1 transcripts.

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Gja5

Panther Classification:

Molecular Function -

gap junction

Gene Ontology Categories:

Function(s) Process(es)

skeletal system development
angiogenesis
blood vessel development
renal system process involved in regulation of systemic arterial blood pressure
regulation of systemic arterial blood pressure
negative regulation of glomerular filtration
outflow tract morphogenesis
endothelium development
cardiac conduction system development
mitral valve development
pulmonary valve formation
ventricular septum development
atrial septum development
septum primum development
atrial ventricular junction remodeling
potassium ion transport
heart development
cell communication by chemical coupling
cell communication by electrical coupling
positive regulation of cell communication by chemical coupling
gap junction assembly
embryonic limb morphogenesis
embryonic heart tube development
foramen ovale closure
regulation of vasodilation
negative regulation of blood pressure
positive regulation of vasoconstriction
positive regulation of vasodilation
artery morphogenesis
protein oligomerization
transmembrane transport
regulation of cardiac muscle contraction
regulation of ventricular cardiac muscle cell membrane repolarization
regulation of atrial cardiac muscle cell membrane depolarization
regulation of ventricular cardiac muscle cell membrane depolarization
ventricular septum morphogenesis
atrial septum morphogenesis
cardiac conduction
ventricular cardiac muscle cell action potential
atrial cardiac muscle cell action potential
SA node cell action potential
AV node cell to bundle of His cell communication by electrical coupling
cell communication by electrical coupling involved in cardiac conduction
cell communication involved in cardiac conduction
AV node cell to bundle of His cell communication
bundle of His cell to Purkinje myocyte communication
regulation of heart rate by cardiac conduction
regulation of renin secretion into blood stream
regulation of membrane depolarization during cardiac muscle cell action potential
vasomotion
gap junction channel activity
gap junction hemi-channel activity
connexin binding
gap junction channel activity involved in cardiac conduction electrical coupling
gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P147373 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 9959 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 523044 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 704373 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 223497 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 80503 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 487191 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 658466 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 360144 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 764532 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 479240 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 766750 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 132499 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 13298 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 78086 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P147373 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P147373 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P147373 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P382979 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 42067 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 54512 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10817670 - -
Affymetrix Rat Gene 1.0 ST Array 10817667 - -
Affymetrix Rat Gene 1.0 ST Array 10817669 - -
Affymetrix Rat Gene 1.0 ST Array 10817668 - -
Affymetrix Rat Gene 1.1 ST Array 10817666 - -
Rat Genome 230 2.0 Array 1387207_at - -
Rat Genome 230 2.0 Array 1387207_PM_at - -
Rat Genome 230 2.0 Array 1368473_PM_at - -
Rat Genome 230 2.0 Array 1368473_at - -
Affymetrix HT Rat Focus Array 1387207_PM_at - -
Affymetrix HT Rat Focus Array 1368473_at - -
Affymetrix HT Rat Focus Array 1387207_at - -
Affymetrix HT Rat Focus Array 1368473_PM_at - -
Affymetrix Rat Clariom S Assay PSR0200012133.rn.1 TC0200001778.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0200012131.rn.1 TC0200001778.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0200012132.rn.1 TC0200001778.rn.1 RTA TC
Rat Expression Set 230 1368473_at - -
Rat Expression Set 230 1387207_PM_at - -
Rat Expression Set 230 1368473_PM_at - -
Rat Expression Set 230 1387207_at - -
Affymetrix Rat Gene 1.0 ST Array 10817666 - -
Rat Genome U34 Set M76535cds_at - -
Rat Genome U34 Set AF022136_at - -
Rat Genome U34 Set M76535cds_g_at - -
Rat Genome U34 Set M76535cds_at - -
Rat Genome U34 Set M76535cds_g_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21067120 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1358773 - -
RatRef-12 Expression BeadChip ILMN_66478 - -

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