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See other CIRBP GE Assays ›
Gene Symbol:
Cirbp
Gene Name:
cold inducible RNA binding protein
Gene Aliases:
-
Chromosome Location:
Chr.7: 12400066 - 12405225 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00579806_g1
Best Coverage
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Cirbp
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_031147.2 NP_112409.2 3 - 4 382 72
XM_006241012.2 XP_006241074.1 3 - 4 387 72
XM_006241013.2 XP_006241075.2 3 - 4 498 72
XM_006241014.2 XP_006241076.1 3 - 4 387 72
XM_006241015.2 XP_006241077.2 3 - 4 498 72
XM_008765132.1 XP_008763354.1 3 - 4 498 72
GenBank mRNA AB000362.1 - 2 - 3 231 72
BC069219.1 - 3 - 4 382 6888887 72

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700002174.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cirbp

Gene Ontology Categories:

Function(s) Process(es)

response to cold
response to UV
negative regulation of translation
stress granule assembly
positive regulation of translation
mRNA stabilization
nucleotide binding
mRNA 3'-UTR binding
translation repressor activity
poly(A) RNA binding
small ribosomal subunit rRNA binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P138790 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 255649 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 570738 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 99055 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P138790 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P138790 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P138790 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P138790 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 84476 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10900587 - -
Affymetrix Rat Gene 1.0 ST Array 10900591 - -
Affymetrix Rat Gene 1.0 ST Array 10900590 - -
Affymetrix Rat Gene 1.0 ST Array 10900585 - -
Affymetrix Rat Gene 1.0 ST Array 10900586 - -
Affymetrix Rat Gene 1.0 ST Array 10900584 - -
Affymetrix Rat Gene 1.0 ST Array 10900588 - -
Affymetrix Rat Gene 1.0 ST Array 10900589 - -
Affymetrix Rat Gene 1.1 ST Array 10900583 - -
Rat Genome 230 2.0 Array 1369083_at - -
Rat Genome 230 2.0 Array 1385904_PM_at - -
Rat Genome 230 2.0 Array 1385904_at - -
Rat Genome 230 2.0 Array 1382809_PM_at - -
Rat Genome 230 2.0 Array 1382809_at - -
Rat Genome 230 2.0 Array 1369083_PM_at - -
Affymetrix HT Rat Focus Array 1385904_at - -
Affymetrix HT Rat Focus Array 1385904_PM_at - -
Affymetrix HT Rat Focus Array 1382809_PM_at - -
Affymetrix HT Rat Focus Array 1369083_PM_at - -
Affymetrix HT Rat Focus Array 1369083_at - -
Affymetrix HT Rat Focus Array 1382809_at - -
Affymetrix Rat Clariom S Assay PSR0700017233.rn.1 TC0700002174.rn.1 RTA TC
Rat Expression Set 230 1369083_at - -
Rat Expression Set 230 1369083_PM_at - -
Rat Expression Set 230 1385904_PM_at - -
Rat Expression Set 230 1385904_at - -
Rat Expression Set 230 1382809_PM_at - -
Rat Expression Set 230 1382809_at - -
Affymetrix Rat Gene 1.0 ST Array 10900583 - -
Rat Genome U34 Set AB000362_at - -
Rat Genome U34 Set rc_AI175751_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21540261 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1369235 - -
RatRef-12 Expression BeadChip ILMN_49747 - -

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