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See other CCS GE Assays ›
Gene Symbol:
Ccs
Gene Name:
copper chaperone for superoxide dismutase
Gene Aliases:
-
Chromosome Location:
Chr.1: 220075251 - 220096319 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00584772_m1
Best Coverage
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Ccs
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_053425.1 NP_445877.1 2 - 3 162 70
GenBank mRNA AF255305.1 - 2 - 3 162 70
BC158586.1 - 2 - 3 122 9099085 70

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100007088.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Transporter Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ccs

Panther Classification:

Molecular Function -

oxidoreductase metabolite interconversion enzyme

Gene Ontology Categories:

Function(s) Process(es)

removal of superoxide radicals
metal ion transport
positive regulation of catalytic activity
oxidation-reduction process
superoxide dismutase activity
copper ion binding
zinc ion binding
superoxide dismutase copper chaperone activity
enzyme binding
metal ion binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P762618 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 185914 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 371772 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 301954 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 190967 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 59325 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 104752 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 963642 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 189981 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 877276 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 317700 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 960335 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 758122 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 390595 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 81675 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P762618 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P762618 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P762618 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P762618 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700296717 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 51605 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 12302 - -
Agilent Rat cDNA Microarray (G4105A) 700296717 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10727653 - -
Affymetrix Rat Gene 1.0 ST Array 10727651 - -
Affymetrix Rat Gene 1.0 ST Array 10727656 - -
Affymetrix Rat Gene 1.0 ST Array 10727657 - -
Affymetrix Rat Gene 1.0 ST Array 10727652 - -
Affymetrix Rat Gene 1.0 ST Array 10727655 - -
Affymetrix Rat Gene 1.0 ST Array 10727650 - -
Affymetrix Rat Gene 1.0 ST Array 10727654 - -
Affymetrix Rat Gene 1.1 ST Array 10727649 - -
Rat Genome 230 2.0 Array 1387038_PM_at - -
Rat Genome 230 2.0 Array 1387038_at - -
Affymetrix HT Rat Focus Array 1387038_at - -
Affymetrix HT Rat Focus Array 1387038_PM_at - -
Affymetrix Rat Clariom S Assay PSR0100056489.rn.1 TC0100007088.rn.1 RTA TC
Rat Expression Set 230 1387038_at - -
Rat Expression Set 230 1387038_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10727649 - -
Rat Genome U34 Set rc_AI236840_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21336359 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1349826 - -
RatRef-12 Expression BeadChip ILMN_69621 - -

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