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Gene Symbol:
Sgpl1
Gene Name:
sphingosine-1-phosphate lyase 1
Gene Aliases:
S1PL, Spgl1, spl
Chromosome Location:
Chr.20: 30699936 - 30769178 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00597481_m1
Best Coverage
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Sgpl1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_173116.1 NP_775139.1 3 - 4 317 109
XM_008772870.1 XP_008771092.1 3 - 4 256 109
XM_008772871.1 XP_008771093.1 3 - 4 266 109
XM_008772872.1 XP_008771094.1 2 - 3 237 109
XM_008772873.1 XP_008771095.1 3 - 4 324 109
GenBank mRNA AJ512838.1 - 3 - 4 317 109

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000001536.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sgpl1

Gene Ontology Categories:

Function(s) Process(es)

luteinization
vasculogenesis
kidney development
fatty acid metabolic process
ceramide metabolic process
nitrogen compound metabolic process
spermatogenesis
androgen metabolic process
estrogen metabolic process
female gonad development
post-embryonic development
fibroblast migration
hemopoiesis
sphingolipid catabolic process
Leydig cell differentiation
regulation of multicellular organism growth
platelet-derived growth factor receptor signaling pathway
skeletal system morphogenesis
palate development
face morphogenesis
apoptotic signaling pathway
sphinganine-1-phosphate aldolase activity
carboxy-lyase activity
pyridoxal phosphate binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P063463 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 475365 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 356690 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 896513 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 430414 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 415506 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 312194 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 960559 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 195040 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 333743 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 601048 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 155530 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 742022 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 531107 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 328067 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 927222 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 587968 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 835951 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 88147 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 855170 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 243779 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 513374 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 237712 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 600381 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 405657 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 287166 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 46123 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 169342 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 759083 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 411881 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 231430 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 966458 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 158336 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 75432 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 18512 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 168554 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 126446 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 23777 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P063463 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P063463 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P063463 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P400211 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 44880 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 22264 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 37678 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10833036 - -
Affymetrix Rat Gene 1.0 ST Array 10833033 - -
Affymetrix Rat Gene 1.0 ST Array 10833041 - -
Affymetrix Rat Gene 1.0 ST Array 10833039 - -
Affymetrix Rat Gene 1.0 ST Array 10833034 - -
Affymetrix Rat Gene 1.0 ST Array 10833037 - -
Affymetrix Rat Gene 1.0 ST Array 10833035 - -
Affymetrix Rat Gene 1.0 ST Array 10833045 - -
Affymetrix Rat Gene 1.0 ST Array 10833032 - -
Affymetrix Rat Gene 1.0 ST Array 10833046 - -
Affymetrix Rat Gene 1.0 ST Array 10833043 - -
Affymetrix Rat Gene 1.0 ST Array 10833040 - -
Affymetrix Rat Gene 1.0 ST Array 10833044 - -
Affymetrix Rat Gene 1.0 ST Array 10833038 - -
Affymetrix Rat Gene 1.0 ST Array 10833042 - -
Affymetrix Rat Gene 1.1 ST Array 10833031 - -
Rat Genome 230 2.0 Array 1382843_at - -
Rat Genome 230 2.0 Array 1382843_PM_at - -
Affymetrix HT Rat Focus Array 1382843_PM_at - -
Affymetrix HT Rat Focus Array 1382843_at - -
Affymetrix Rat Clariom S Assay PSR2000012499.rn.1 TC2000001536.rn.1 RTA TC
Rat Expression Set 230 1382843_at - -
Rat Expression Set 230 1382843_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10833031 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21577869 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1352496 - -
RatRef-12 Expression BeadChip ILMN_57727 - -

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