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See other ABRA GE Assays ›
Gene Symbol:
Abra
Gene Name:
actin-binding Rho activating protein
Gene Aliases:
Ms1, Stars
Chromosome Location:
Chr.7: 80792615 - 80796683 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00598518_m1
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information
  • Citations (1)

Genomic Map

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Assay Details

Gene Symbol: Abra
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_175844.3 NP_787038.1 1 - 2 702 71
GenBank mRNA AF336113.1 - 1 - 2 702 71
BC158575.1 - 1 - 2 688 9033092 71

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700003062.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Abra

Gene Ontology Categories:

Function(s) Process(es)

protein import into nucleus, translocation
transcription, DNA-templated
positive regulation of Rho protein signal transduction
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of sequence-specific DNA binding transcription factor activity
transcription coactivator activity
actin binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P600215 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 434546 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 461855 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 400008 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 42345 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P600215 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P600215 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P600215 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P600215 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 65428 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10903526 - -
Affymetrix Rat Gene 1.0 ST Array 10903525 - -
Affymetrix Rat Gene 1.1 ST Array 10903524 - -
Rat Genome 230 2.0 Array 1390881_PM_at - -
Rat Genome 230 2.0 Array 1390881_at - -
Affymetrix HT Rat Focus Array 1390881_PM_at - -
Affymetrix HT Rat Focus Array 1390881_at - -
Affymetrix Rat Clariom S Assay PSR0700023642.rn.1 TC0700003062.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0700023641.rn.1 TC0700003062.rn.1 RTA TC
Rat Expression Set 230 1390881_PM_at - -
Rat Expression Set 230 1390881_at - -
Affymetrix Rat Gene 1.0 ST Array 10903524 - -
Rat Genome U34 Set rc_AI172339_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 22352862 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1349223 - -
RatRef-12 Expression BeadChip ILMN_68074 - -

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Citations (1)

Comparative in silico analysis identifies bona fide MyoD binding sites within the Myocyte stress 1 gene promoter.
Authors
Ounzain S, Dacwag CS, Samani NJ, Imbalzano AN, Chong NW
Journal
Bmc Mol Biol - Page No 50 (Tue Jan 01 00:00:00 EST 2008)
Volume (Year)
9 (2008)
Product Usage
-

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