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See other PPM1A GE Assays ›
Gene Symbol:
Ppm1a
Gene Name:
protein phosphatase, Mg2+/Mn2+ dependent, 1A
Gene Aliases:
Pp2c1
Chromosome Location:
Chr.6: 94433661 - 94490408 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00690493_m1
Size
Availability Made To Order
Catalog # 4351372
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Ppm1a
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_017038.1 NP_058734.1 5 - 6 1208 103
XM_006240193.2 XP_006240255.1 5 - 6 4511 103
XM_006240194.2 XP_006240256.1 5 - 6 1465 103
XM_006240195.2 XP_006240257.1 5 - 6 1229 103
GenBank mRNA BC097333.1 - 638 103
J04503.1 - 5 - 6 1208 103

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600000949.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Protein Phosphatase 3' Most Mammalian Gene Collection Rattus norvegicus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ppm1a

Gene Ontology Categories:

Function(s) Process(es)

protein dephosphorylation
N-terminal protein myristoylation
negative regulation of SMAD protein complex assembly
Wnt signaling pathway
dephosphorylation
positive regulation of Wnt signaling pathway
negative regulation of transforming growth factor beta receptor signaling pathway
negative regulation of BMP signaling pathway
peptidyl-threonine dephosphorylation
negative regulation of NF-kappaB import into nucleus
positive regulation of I-kappaB kinase/NF-kappaB signaling
negative regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of transcription, DNA-templated
positive regulation of protein export from nucleus
cellular response to transforming growth factor beta stimulus
magnesium ion binding
phosphoprotein phosphatase activity
protein serine/threonine phosphatase activity
signal transducer activity
protein binding
protein C-terminus binding
manganese ion binding
calmodulin-dependent protein phosphatase activity
R-SMAD binding

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P095484 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 202498 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 412405 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 683180 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 328650 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 166068 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 854223 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 565224 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 644077 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 309084 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 488742 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 146716 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 697099 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 874520 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 388380 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 583500 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 28499 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 488859 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 69497 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 525756 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 799408 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 227042 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 461135 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 960010 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 232140 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 747543 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 342928 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 877052 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 317366 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 170196 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 75560 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 32313 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 38461 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 37323 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 9019 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P095484 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P095484 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P095484 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P519963 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 24361 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 84809 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 12488 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 88514 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 30513 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 78589 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10885197 - -
Affymetrix Rat Gene 1.0 ST Array 10885201 - -
Affymetrix Rat Gene 1.0 ST Array 10885194 - -
Affymetrix Rat Gene 1.0 ST Array 10885196 - -
Affymetrix Rat Gene 1.0 ST Array 10885195 - -
Affymetrix Rat Gene 1.0 ST Array 10885199 - -
Affymetrix Rat Gene 1.0 ST Array 10885200 - -
Affymetrix Rat Gene 1.0 ST Array 10885198 - -
Affymetrix Rat Gene 1.1 ST Array 10885193 - -
Rat Genome 230 2.0 Array 1383475_at - -
Rat Genome 230 2.0 Array 1368859_PM_at - -
Rat Genome 230 2.0 Array 1368859_at - -
Rat Genome 230 2.0 Array 1383475_PM_at - -
Affymetrix HT Rat Focus Array 1368859_at - -
Affymetrix HT Rat Focus Array 1368859_PM_at - -
Affymetrix Rat Clariom S Assay PSR0600006402.rn.1 TC0600000949.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0600006403.rn.1 TC0600000949.rn.1 RTA TC
Rat Expression Set 230 1368859_PM_at - -
Rat Expression Set 230 1368859_at - -
Affymetrix Rat Gene 1.0 ST Array 10885193 - -
Rat Genome U34 Set J04503_at - -
Rat Genome U34 Set J04503_g_at - -
Rat Genome U34 Set rc_AA944569_at - -
Rat Genome U34 Set rc_AI230501_at - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1352550 - -
RatRef-12 Expression BeadChip ILMN_60957 - -

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