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See other PDGFA GE Assays ›
Gene Symbol:
Pdgfa
Gene Name:
platelet-derived growth factor alpha polypeptide
Gene Aliases:
PDGFACP
Chromosome Location:
Chr.12: 17732358 - 17756186 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00709363_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Pdgfa
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_012801.1 NP_036933.1 4 - 5 647 62
XM_006248918.2 XP_006248980.1 2 - 3 629 62
XM_006248919.2 XP_006248981.1 2 - 3 629 62
XM_008768940.1 XP_008767162.1 3 - 4 2228 62
GenBank mRNA BC061731.1 - 2 - 3 634 5598667 62
D10106.1 - 2 - 3 206 62
L06238.1 - 4 - 5 647 62
L06894.1 - 3 - 4 291 62
Z14120.1 - 2 - 3 141 62

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200000309.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pdgfa

Panther Classification:

Molecular Function -

growth factor

Gene Ontology Categories:

Function(s) Process(es)

angiogenesis
response to hypoxia
hair follicle development
positive regulation of mesenchymal cell proliferation
transforming growth factor beta receptor signaling pathway
blood coagulation
positive regulation of cell proliferation
response to wounding
organ morphogenesis
response to organic substance
response to inorganic substance
negative regulation of phosphatidylinositol biosynthetic process
negative regulation of platelet activation
positive regulation of phosphatidylinositol 3-kinase signaling
regulation of smooth muscle cell migration
cell projection assembly
actin cytoskeleton organization
positive regulation of cell migration
positive regulation of protein autophosphorylation
response to estradiol
response to retinoic acid
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway
wound healing
response to drug
positive regulation of MAP kinase activity
positive regulation of MAPK cascade
skin development
positive regulation of DNA replication
platelet-derived growth factor receptor signaling pathway
positive regulation of fibroblast proliferation
lung alveolus development
digestive tract development
inner ear development
regulation of peptidyl-tyrosine phosphorylation
negative chemotaxis
positive regulation of cell division
positive regulation of protein kinase B signaling
regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling
positive regulation of ERK1 and ERK2 cascade
regulation of glomerular mesangial cell proliferation
embryonic lung development
regulation of DNA biosynthetic process
platelet-derived growth factor receptor binding
collagen binding
growth factor activity
protein homodimerization activity
protein heterodimerization activity
platelet-derived growth factor binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR1200002398.rn.1 TC1200000309.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1200002399.rn.1 TC1200000309.rn.1 RTA TC

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