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See other TAP1 GE Assays ›
Gene Symbol:
Tap1
Gene Name:
transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Gene Aliases:
Abcb2, Cim, Tap2
Chromosome Location:
Chr.20: 3979302 - 3989669 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00709612_m1
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tap1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_032055.4 NP_114444.2 10 - 11 2024 124
GenBank mRNA BC101854.1 - 10 - 11 2291 7933924 124
KC222902.1 - 10 - 11 1965 124
KC222903.1 - 10 - 11 1965 124
KC222904.1 - 10 - 11 1965 124
KC222905.1 - 10 - 11 1782 124
KC222906.1 - 10 - 11 1965 124
X57523.1 - 10 - 11 2012 124
Y10230.1 - 10 - 11 1965 124
Y10231.1 - 10 - 11 1965 124
Y10233.1 - 10 - 11 1965 124
Y10234.1 - 10 - 11 1965 124
Y10235.1 - 10 - 11 1965 124

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000131.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Transporter 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tap1

Panther Classification:

Molecular Function -

ATP-binding cassette (ABC) transporter

Gene Ontology Categories:

Function(s) Process(es)

defense response
metabolic process
protein transport
peptide transport
intracellular transport of viral protein in host cell
antigen processing and presentation of endogenous peptide antigen via MHC class I
protection from natural killer cell mediated cytotoxicity
cytosol to ER transport
peptide antigen transport
transmembrane transport
nucleotide binding
ATP binding
peptide transporter activity
peptide antigen-transporting ATPase activity
peptide-transporting ATPase activity
ATPase activity
MHC class Ib protein binding
MHC class I protein binding
peptide antigen binding
ATPase activity, coupled to transmembrane movement of substances
protein homodimerization activity
ADP binding
TAP1 binding
TAP2 binding
tapasin binding
protein heterodimerization activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P032208 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 908666 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 642870 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 691712 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 622296 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 70646 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 893862 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 418669 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 288146 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 35217 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P032208 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P032208 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P032208 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P451916 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 701191847 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 29568 - -
Agilent Rat cDNA Microarray (G4105A) 701191847 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10831616 - -
Affymetrix Rat Gene 1.0 ST Array 10831608 - -
Affymetrix Rat Gene 1.0 ST Array 10831607 - -
Affymetrix Rat Gene 1.0 ST Array 10831611 - -
Affymetrix Rat Gene 1.0 ST Array 10831615 - -
Affymetrix Rat Gene 1.0 ST Array 10831610 - -
Affymetrix Rat Gene 1.0 ST Array 10831614 - -
Affymetrix Rat Gene 1.0 ST Array 10831613 - -
Affymetrix Rat Gene 1.0 ST Array 10831609 - -
Affymetrix Rat Gene 1.0 ST Array 10831612 - -
Affymetrix Rat Gene 1.0 ST Array 10831617 - -
Affymetrix Rat Gene 1.1 ST Array 10831606 - -
Rat Genome 230 2.0 Array 1388149_PM_at - -
Rat Genome 230 2.0 Array 1375379_PM_at - -
Rat Genome 230 2.0 Array 1375379_at - -
Rat Genome 230 2.0 Array 1388149_at - -
Affymetrix HT Rat Focus Array 1375379_PM_at - -
Affymetrix HT Rat Focus Array 1388149_PM_at - -
Affymetrix HT Rat Focus Array 1375379_at - -
Affymetrix HT Rat Focus Array 1388149_at - -
Affymetrix Rat Clariom S Assay PSR2000001050.rn.1 TC2000000131.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000001051.rn.1 TC2000000131.rn.1 RTA TC
Rat Expression Set 230 1375379_at - -
Rat Expression Set 230 1388149_at - -
Rat Expression Set 230 1375379_PM_at - -
Rat Expression Set 230 1388149_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10831606 - -
Rat Genome U34 Set X57523_g_at - -
Rat Genome U34 Set X57523_at - -
Rat Genome U34 Set X57523_at - -
Rat Genome U34 Set X57523_g_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21235791 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1374617 - -
RatRef-12 Expression BeadChip ILMN_68864 - -

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