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See other ATP5D GE Assays ›
Gene Symbol:
Atp5d
Gene Name:
ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
Gene Aliases:
-
Chromosome Location:
Chr.7: 12426807 - 12432120 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00756371_g1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Atp5d
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_139106.1 NP_620806.1 3 - 4 439 58
XM_006240845.2 XP_006240907.1 4 - 5 954 58
GenBank mRNA BC161836.1 - 3 - 4 2099 9098303 58
FQ214102.1 - 647 58
FQ223899.1 - 3 - 4 487 58
U00926.1 - 3 - 4 439 58

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700002176.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Transporter 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atp5d

Panther Classification:

Molecular Function -

ATP synthase

Gene Ontology Categories:

Function(s) Process(es)

ATP biosynthetic process
ATP synthesis coupled proton transport
ATP metabolic process
ATPase activity
protein complex binding
proton-transporting ATP synthase activity, rotational mechanism
proton-transporting ATPase activity, rotational mechanism

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P685906 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 807190 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 150560 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P685906 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P685906 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P685906 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P685906 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700174803 - -
Agilent Rat cDNA Microarray (G4105A) 700174803 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10900605 - -
Affymetrix Rat Gene 1.0 ST Array 10900603 - -
Affymetrix Rat Gene 1.0 ST Array 10900602 - -
Affymetrix Rat Gene 1.0 ST Array 10900604 - -
Affymetrix Rat Gene 1.1 ST Array 10900601 - -
Rat Genome 230 2.0 Array 1370278_PM_at - -
Rat Genome 230 2.0 Array 1370278_at - -
Affymetrix HT Rat Focus Array 1370278_PM_at - -
Affymetrix HT Rat Focus Array 1370278_at - -
Affymetrix Rat Clariom S Assay PSR0700017283.rn.1 TC0700002176.rn.1 RTA TC
Rat Expression Set 230 1370278_PM_at - -
Rat Expression Set 230 1370278_at - -
Affymetrix Rat Gene 1.0 ST Array 10900601 - -
Rat Genome U34 Set U00926_at - -
Rat Genome U34 Set U00926_g_at - -
Rat Genome U34 Set rc_AI104953_s_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 22371192 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1363852 - -
RatRef-12 Expression BeadChip ILMN_56814 - -

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