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See other HDAC10 GE Assays ›
Gene Symbol:
Hdac10
Gene Name:
histone deacetylase 10
Gene Aliases:
-
Chromosome Location:
Chr.7: 130102335 - 130108346 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01407364_g1
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Hdac10
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001035000.1 NP_001030172.1 17 - 18 1978 56
XM_006242218.1 XP_006242280.1 19 - 20 3121 56
XM_006242219.1 XP_006242281.1 18 - 19 3064 56
XM_006242220.1 XP_006242282.1 18 - 19 2944 56
GenBank mRNA BC092573.1 - 17 - 18 1978 7323327 56

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700003686.rn.1

Set Membership:

Amplicon length less than or equal to 70 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription, DNA-templated
protein deacetylation
oligodendrocyte development
histone deacetylation
negative regulation of transcription, DNA-templated
histone H3-K9 modification
histone H3 deacetylation
histone H4 deacetylation
molecular_function
histone deacetylase activity
enzyme binding
NAD-dependent histone deacetylase activity (H3-K14 specific)
protein deacetylase activity
histone deacetylase binding
NAD-dependent histone deacetylase activity (H3-K9 specific)
NAD-dependent histone deacetylase activity (H4-K16 specific)
NAD-dependent histone deacetylase activity (H3-K18 specific)

MicroArray Probes:

Agilent Affymetrix ABI

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P121935 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 773229 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 463881 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 100142 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P121935 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P121935 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P121935 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P121935 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10906138 - -
Affymetrix Rat Gene 1.0 ST Array 10906123 - -
Affymetrix Rat Gene 1.0 ST Array 10906131 - -
Affymetrix Rat Gene 1.0 ST Array 10906127 - -
Affymetrix Rat Gene 1.0 ST Array 10906132 - -
Affymetrix Rat Gene 1.0 ST Array 10906135 - -
Affymetrix Rat Gene 1.0 ST Array 10906136 - -
Affymetrix Rat Gene 1.0 ST Array 10906122 - -
Affymetrix Rat Gene 1.0 ST Array 10906133 - -
Affymetrix Rat Gene 1.0 ST Array 10906134 - -
Affymetrix Rat Gene 1.0 ST Array 10906129 - -
Affymetrix Rat Gene 1.0 ST Array 10906125 - -
Affymetrix Rat Gene 1.0 ST Array 10906121 - -
Affymetrix Rat Gene 1.0 ST Array 10906141 - -
Affymetrix Rat Gene 1.0 ST Array 10906139 - -
Affymetrix Rat Gene 1.0 ST Array 10906140 - -
Affymetrix Rat Gene 1.0 ST Array 10906137 - -
Affymetrix Rat Gene 1.0 ST Array 10906126 - -
Affymetrix Rat Gene 1.0 ST Array 10906120 - -
Affymetrix Rat Gene 1.1 ST Array 10906119 - -
Rat Genome 230 2.0 Array 1384991_PM_a_at - -
Rat Genome 230 2.0 Array 1390700_PM_s_at - -
Rat Genome 230 2.0 Array 1384992_PM_at - -
Rat Genome 230 2.0 Array 1380608_at - -
Rat Genome 230 2.0 Array 1384991_a_at - -
Rat Genome 230 2.0 Array 1384992_at - -
Rat Genome 230 2.0 Array 1380608_PM_at - -
Rat Genome 230 2.0 Array 1390700_s_at - -
Affymetrix HT Rat Focus Array 1390700_s_at - -
Affymetrix HT Rat Focus Array 1384991_PM_a_at - -
Affymetrix HT Rat Focus Array 1384992_at - -
Affymetrix HT Rat Focus Array 1384991_a_at - -
Affymetrix HT Rat Focus Array 1380608_PM_at - -
Affymetrix HT Rat Focus Array 1384992_PM_at - -
Affymetrix HT Rat Focus Array 1390700_PM_s_at - -
Affymetrix HT Rat Focus Array 1380608_at - -
Affymetrix Rat Clariom S Assay PSR0700029147.rn.1 TC0700003686.rn.1 RTA TC
Rat Expression Set 230 1390700_s_at - -
Rat Expression Set 230 1390700_PM_s_at - -
Rat Expression Set 230 1384992_at - -
Rat Expression Set 230 1384991_a_at - -
Rat Expression Set 230 1384991_PM_a_at - -
Rat Expression Set 230 1384992_PM_at - -
Rat Expression Set 230 1380608_PM_at - -
Rat Expression Set 230 1380608_at - -
Affymetrix Rat Gene 1.0 ST Array 10906119 - -
Rat Genome U34 Set rc_AI236142_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 22131183 - -

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