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See other GJA1 GE Assays ›
Gene Symbol:
Gja1
Gene Name:
gap junction protein, alpha 1
Gene Aliases:
Cx43
Chromosome Location:
Chr.20: 37876589 - 37889097 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01433957_m1
Size
Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Gja1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_012567.2 NP_036699.1 1 - 2 188 87
GenBank mRNA AY324140.1 - 1 - 2 188 87
AY555737.1 - 1 - 2 221 87
BC081842.1 - 1 - 2 184 7105924 87

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More Information


Additional Information:

This assay is in the 5'UTR region of the AY324140.1, AY555737.1, BC081842.1, NM_012567.2 transcripts.

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Gja1

Panther Classification:

Molecular Function -

gap junction

Gene Ontology Categories:

Function(s) Process(es)

osteoblast differentiation
in utero embryonic development
neuron migration
negative regulation of endothelial cell proliferation
heart looping
epithelial cell maturation
lens development in camera-type eye
chronic inflammatory response
positive regulation of glomerular filtration
endothelium development
atrial ventricular junction remodeling
apoptotic process
cell communication
signal transduction
positive regulation of cytosolic calcium ion concentration
cell-cell signaling
heart development
adult heart development
regulation of heart contraction
negative regulation of cell proliferation
response to pH
response to glucose
vascular transport
positive regulation of gene expression
negative regulation of gene expression
cell communication by chemical coupling
cell communication by electrical coupling
positive regulation of cell communication by chemical coupling
ATP transport
gap junction assembly
regulation of bone mineralization
positive regulation of insulin secretion
ion transmembrane transport
response to fluid shear stress
embryonic heart tube development
embryonic digit morphogenesis
positive regulation of I-kappaB kinase/NF-kappaB signaling
skeletal muscle tissue regeneration
response to peptide hormone
cell-cell junction organization
positive regulation of osteoblast differentiation
positive regulation of protein catabolic process
positive regulation of striated muscle tissue development
positive regulation of vasoconstriction
positive regulation of vasodilation
regulation of bone remodeling
blood vessel morphogenesis
neuron projection morphogenesis
protein oligomerization
regulation of calcium ion transport
transmembrane transport
negative regulation of cardiac muscle cell proliferation
milk ejection
regulation of ventricular cardiac muscle cell membrane repolarization
regulation of atrial cardiac muscle cell membrane depolarization
regulation of ventricular cardiac muscle cell membrane depolarization
negative regulation of wound healing
cardiac conduction
cellular response to mechanical stimulus
negative regulation of DNA biosynthetic process
regulation of bicellular tight junction assembly
positive regulation of behavioral fear response
signal transducer activity
receptor binding
gap junction channel activity
protein binding
ion transmembrane transporter activity
SH3 domain binding
protein domain specific binding
PDZ domain binding
beta-tubulin binding
connexin binding
scaffold protein binding
gap junction channel activity involved in cell communication by electrical coupling

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P393551 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 701967 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 596692 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 839570 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 193550 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 880600 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 35111 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 563224 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 371072 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 498032 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 550303 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 14867 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P393551 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P393551 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P393551 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P393551 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P278604 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 79812 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 67759 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10830191 - -
Affymetrix Rat Gene 1.0 ST Array 10830190 - -
Affymetrix Rat Gene 1.1 ST Array 10830189 - -
Rat Genome 230 2.0 Array 1369639_at - -
Rat Genome 230 2.0 Array 1369640_at - -
Rat Genome 230 2.0 Array 1369639_PM_at - -
Rat Genome 230 2.0 Array 1369640_PM_at - -
Rat Genome 230 2.0 Array 1372002_at - -
Rat Genome 230 2.0 Array 1372002_PM_at - -
Affymetrix HT Rat Focus Array 1369639_PM_at - -
Affymetrix HT Rat Focus Array 1369640_PM_at - -
Affymetrix HT Rat Focus Array 1369640_at - -
Affymetrix HT Rat Focus Array 1372002_at - -
Affymetrix HT Rat Focus Array 1369639_at - -
Affymetrix HT Rat Focus Array 1372002_PM_at - -
Affymetrix Rat Clariom S Assay PSR2000006345.rn.1 TC2000000750.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006338.rn.1 TC2000000750.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006342.rn.1 TC2000000750.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006343.rn.1 TC2000000750.rn.1 RTA TC
Rat Expression Set 230 1372002_PM_at - -
Rat Expression Set 230 1372002_at - -
Rat Expression Set 230 1369640_at - -
Rat Expression Set 230 1369639_at - -
Rat Expression Set 230 1369640_PM_at - -
Rat Expression Set 230 1369639_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10830189 - -
Rat Genome U34 Set rc_AI029183_s_at - -
Rat Genome U34 Set rc_AI043613_at - -
Rat Genome U34 Set rc_AA858448_at - -
Rat Genome U34 Set rc_AI029183_s_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21672527 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1355543 - -
RatRef-12 Expression BeadChip ILMN_51511 - -

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