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See other SMIM8 GE Assays ›
Gene Symbol:
Smim8
Gene Name:
small integral membrane protein 8
Gene Aliases:
RGD1305158
Chromosome Location:
Chr.5: 50230617 - 50239647 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01439510_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Smim8
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001106644.1 NP_001100114.1 3 - 4 643 79
NM_001201374.1 NP_001188303.1 2 - 3 265 79
NM_001201375.1 NP_001188304.1 2 - 3 509 79
XM_006237987.2 XP_006238049.1 3 - 4 548 79
XM_006237988.2 XP_006238050.1 2 - 3 431 79
GenBank mRNA DY544415.1 - 2 - 3 265 79
FQ226097.1 - 2 - 3 470 79

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500002498.rn.1

Set Membership:

Amplicon length between 71 and 85 3' Most Recommended Assay Rattus norvegicus 1700 Probe spans exons

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P101386 - -
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P1060444 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 871353 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 20959 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 27790 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 261774 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 31906 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 503347 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 76762 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 145154 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P101386 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1060444 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P101386 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1060444 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P101386 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P1060444 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P1060444 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 16278 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10875934 - -
Affymetrix Rat Gene 1.0 ST Array 10875933 - -
Affymetrix Rat Gene 1.0 ST Array 10875935 - -
Affymetrix Rat Gene 1.1 ST Array 10875932 - -
Rat Genome 230 2.0 Array 1399107_PM_at - -
Rat Genome 230 2.0 Array 1399164_PM_a_at - -
Rat Genome 230 2.0 Array 1399107_at - -
Rat Genome 230 2.0 Array 1394240_at - -
Rat Genome 230 2.0 Array 1394240_PM_at - -
Rat Genome 230 2.0 Array 1399164_a_at - -
Affymetrix HT Rat Focus Array 1399107_at - -
Affymetrix HT Rat Focus Array 1399107_PM_at - -
Affymetrix HT Rat Focus Array 1399164_PM_a_at - -
Affymetrix HT Rat Focus Array 1399164_a_at - -
Affymetrix HT Rat Focus Array 1394240_PM_at - -
Affymetrix HT Rat Focus Array 1394240_at - -
Affymetrix Rat Clariom S Assay PSR0500018491.rn.1 TC0500002498.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0500018501.rn.1 TC0500002498.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0500018493.rn.1 TC0500002498.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0500018490.rn.1 TC0500002498.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0500018494.rn.1 TC0500002498.rn.1 RTA TC
Rat Expression Set 230 1399107_PM_at - -
Rat Expression Set 230 1394240_at - -
Rat Expression Set 230 1394240_PM_at - -
Rat Expression Set 230 1399164_PM_a_at - -
Rat Expression Set 230 1399164_a_at - -
Rat Expression Set 230 1399107_at - -
Affymetrix Rat Gene 1.0 ST Array 10875932 - -
Rat Genome U34 Set rc_AI014154_s_at - -
Rat Genome U34 Set rc_AA963767_at - -
Rat Genome U34 Set rc_AA819471_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 20719137 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1369677 - -

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