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See other RBM42 GE Assays ›
Gene Symbol:
Rbm42
Gene Name:
RNA binding motif protein 42
Gene Aliases:
RGD1306184
Chromosome Location:
Chr.1: 89099296 - 89109251 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01457978_m1
Best Coverage
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Rbm42
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001014159.2 NP_001014181.2 8 - 9 1229 102
XM_006228781.2 XP_006228843.1 7 - 8 1167 102
GenBank mRNA BC079321.1 - 8 - 9 1187 7135399 102
FQ216075.1 - 4 - 5 611 102
FQ222852.1 - 7 - 8 1112 102
FQ235070.1 - 4 - 5 579 102

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100005163.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rbm42

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of mRNA splicing, via spliceosome
nucleotide binding
poly(A) RNA binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P787743 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 158017 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 339289 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 120440 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 119104 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 522815 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 800285 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 645994 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 63467 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 47888 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P787743 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P787743 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P787743 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P787743 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 41782 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10720743 - -
Affymetrix Rat Gene 1.0 ST Array 10720739 - -
Affymetrix Rat Gene 1.0 ST Array 10720738 - -
Affymetrix Rat Gene 1.0 ST Array 10720744 - -
Affymetrix Rat Gene 1.0 ST Array 10720735 - -
Affymetrix Rat Gene 1.0 ST Array 10720736 - -
Affymetrix Rat Gene 1.0 ST Array 10720740 - -
Affymetrix Rat Gene 1.0 ST Array 10720742 - -
Affymetrix Rat Gene 1.0 ST Array 10720737 - -
Affymetrix Rat Gene 1.0 ST Array 10720741 - -
Affymetrix Rat Gene 1.1 ST Array 10720734 - -
Rat Genome 230 2.0 Array 1371502_PM_at - -
Rat Genome 230 2.0 Array 1371502_at - -
Affymetrix HT Rat Focus Array 1371502_PM_at - -
Affymetrix HT Rat Focus Array 1371502_at - -
Affymetrix Rat Clariom S Assay PSR0100041534.rn.1 TC0100005163.rn.1 RTA TC
Rat Expression Set 230 1371502_PM_at - -
Rat Expression Set 230 1371502_at - -
Affymetrix Rat Gene 1.0 ST Array 10720734 - -
Rat Genome U34 Set rc_AA818118_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21724217 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1353872 - -

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