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See other ACOX1 GE Assays ›
Gene Symbol:
Acox1
Gene Name:
acyl-CoA oxidase 1, palmitoyl
Gene Aliases:
RATACOA1
Chromosome Location:
Chr.10: 104724534 - 104748003 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01460628_m1
Best Coverage
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Acox1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_017340.2 NP_059036.1 2031 63
GenBank mRNA BC085743.1 - 2031 7109722 63
J02752.1 - 2014 63

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000004144.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Acox1

Panther Classification:

Molecular Function -

oxidoreductase

Gene Ontology Categories:

Function(s) Process(es)

very long-chain fatty acid metabolic process
generation of precursor metabolites and energy
lipid metabolic process
fatty acid beta-oxidation
prostaglandin metabolic process
spermatogenesis
peroxisome fission
fatty acid oxidation
fatty acid beta-oxidation using acyl-CoA oxidase
lipid homeostasis
positive regulation of cholesterol homeostasis
acyl-CoA dehydrogenase activity
acyl-CoA oxidase activity
receptor binding
fatty acid binding
palmitoyl-CoA oxidase activity
PDZ domain binding
protein N-terminus binding
flavin adenine dinucleotide binding
FAD binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P059385 - -
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P059390 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 149433 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 695422 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 804418 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 147154 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 289456 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 155521 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 748736 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 508107 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 205528 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 276395 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 836670 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 280388 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 263687 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 18811 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 167192 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 96416 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 113260 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 35936 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P059390 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P059385 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P059390 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P059385 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P059385 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P059390 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P11926 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 701646795 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 99120 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 64333 - -
Agilent Rat cDNA Microarray (G4105A) 701646795 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10749180 - -
Affymetrix Rat Gene 1.0 ST Array 10749176 - -
Affymetrix Rat Gene 1.0 ST Array 10749175 - -
Affymetrix Rat Gene 1.0 ST Array 10749177 - -
Affymetrix Rat Gene 1.0 ST Array 10749183 - -
Affymetrix Rat Gene 1.0 ST Array 10749184 - -
Affymetrix Rat Gene 1.0 ST Array 10749174 - -
Affymetrix Rat Gene 1.0 ST Array 10749181 - -
Affymetrix Rat Gene 1.0 ST Array 10749178 - -
Affymetrix Rat Gene 1.0 ST Array 10749173 - -
Affymetrix Rat Gene 1.0 ST Array 10749186 - -
Affymetrix Rat Gene 1.0 ST Array 10749179 - -
Affymetrix Rat Gene 1.0 ST Array 10749182 - -
Affymetrix Rat Gene 1.1 ST Array 10749172 - -
Rat Genome 230 2.0 Array 1367680_PM_at - -
Rat Genome 230 2.0 Array 1367680_at - -
Affymetrix HT Rat Focus Array 1367680_PM_at - -
Affymetrix HT Rat Focus Array 1367680_at - -
Affymetrix Rat Clariom S Assay PSR1000037717.rn.1 TC1000004144.rn.1 RTA TC
Rat Expression Set 230 1367680_PM_at - -
Rat Expression Set 230 1367680_at - -
Affymetrix Rat Gene 1.0 ST Array 10749172 - -
Rat Genome U34 Set rc_AA799489_at - -
Rat Genome U34 Set rc_AA799489_g_at - -
Rat Genome U34 Set J02752_at - -
Rat Genome U34 Set J02752_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21347047 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1363410 - -
RatRef-12 Expression BeadChip ILMN_61835 - -

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