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See other MESP1 GE Assays ›
Gene Symbol:
Mesp1
Gene Name:
mesoderm posterior basic helix-loop-helix transcription factor 1
Gene Aliases:
-
Chromosome Location:
Chr.1: 141532390 - 141533908 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01477493_g1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Mesp1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001107531.1 NP_001101001.1 1 - 2 928 73

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100005852.rn.1

Set Membership:

Amplicon length between 71 and 85 3' Most Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

heart looping
heart morphogenesis
secondary heart field specification
embryonic heart tube morphogenesis
cardiac atrium formation
cardiac ventricle formation
sinus venosus morphogenesis
growth involved in heart morphogenesis
cardioblast anterior-lateral migration
cardioblast migration
transcription from RNA polymerase II promoter
gastrulation
mesodermal cell migration
neurogenesis
signal transduction involved in regulation of gene expression
positive regulation of Notch signaling pathway involved in heart induction
negative regulation of mesodermal cell fate specification
negative regulation of endodermal cell fate specification
endothelial cell differentiation
positive regulation of Notch signaling pathway
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
lateral mesoderm development
positive regulation of striated muscle cell differentiation
cardiac muscle cell differentiation
cardiac cell fate determination
sinoatrial node cell differentiation
cardiac vascular smooth muscle cell differentiation
cardioblast migration to the midline involved in heart field formation
positive regulation of hepatocyte differentiation
positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcription factor activity, sequence-specific DNA binding
enhancer binding
transcription regulatory region DNA binding
protein dimerization activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P045122 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 700675 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P045122 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P045122 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P045122 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P22641 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P522779 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10722990 - -
Affymetrix Rat Gene 1.0 ST Array 10722991 - -
Affymetrix Rat Gene 1.1 ST Array 10722989 - -
Rat Genome 230 2.0 Array 1393741_PM_at - -
Rat Genome 230 2.0 Array 1393741_at - -
Affymetrix HT Rat Focus Array 1393741_at - -
Affymetrix HT Rat Focus Array 1393741_PM_at - -
Affymetrix Rat Clariom S Assay PSR0100046595.rn.1 TC0100005852.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0100046596.rn.1 TC0100005852.rn.1 RTA TC
Rat Expression Set 230 1393741_at - -
Rat Expression Set 230 1393741_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10722989 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21780773 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1371409 - -

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