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See other PTPRE GE Assays ›
Gene Symbol:
Ptpre
Gene Name:
protein tyrosine phosphatase, receptor type, E
Gene Aliases:
PTPepsilon
Chromosome Location:
Chr.1: 207883538 - 207987123 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01479726_m1
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Ptpre
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_053767.1 NP_446219.1 9 - 10 853 59
XM_006230449.2 XP_006230511.1 11 - 12 3774 59
XM_006230450.2 XP_006230512.1 8 - 9 781 59
XM_006230451.2 XP_006230513.1 9 - 10 3085 59
XM_008759971.1 XP_008758193.1 10 - 11 1452 59
XM_008759972.1 XP_008758194.1 10 - 11 1953 59
GenBank mRNA BC166573.1 - 9 - 10 863 7320594 59
D78610.1 - 8 - 9 727 59
D78613.1 - 9 - 10 846 59
Y07833.1 - 1 - 2 113 59

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100008058.rn.1

Set Membership:

Amplicon length less than or equal to 70 Protein Phosphatase Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Panther Classification:

Molecular Function -

protein phosphatase protein modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)

transmembrane receptor protein tyrosine phosphatase signaling pathway
regulation of mast cell activation
peptidyl-tyrosine dephosphorylation
negative regulation of insulin receptor signaling pathway
molecular_function
protein tyrosine phosphatase activity
protein homodimerization activity

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P137130 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 377247 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 177325 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 621186 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 194044 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 658271 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 399032 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 330643 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 645483 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 179850 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 864738 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 573730 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 421759 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 780486 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 99016 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 477507 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 6414 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 198115 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 804625 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 273657 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 673869 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 923815 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 918883 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 767080 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 235093 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 112154 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 659057 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 519245 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 273192 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 145762 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 902531 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 807234 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 491321 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 710786 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 445273 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 174744 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 74357 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 171586 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 100477 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P137130 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P137130 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P137130 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P170541 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P370030 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P278613 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P111941 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P370033 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700946559 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700526741 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 17888 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 47960 - -
Agilent Rat cDNA Microarray (G4105A) 700526741 - -
Agilent Rat cDNA Microarray (G4105A) 700946559 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10711858 - -
Affymetrix Rat Gene 1.0 ST Array 10711869 - -
Affymetrix Rat Gene 1.0 ST Array 10711874 - -
Affymetrix Rat Gene 1.0 ST Array 10711865 - -
Affymetrix Rat Gene 1.0 ST Array 10711866 - -
Affymetrix Rat Gene 1.0 ST Array 10711855 - -
Affymetrix Rat Gene 1.0 ST Array 10711854 - -
Affymetrix Rat Gene 1.0 ST Array 10711860 - -
Affymetrix Rat Gene 1.0 ST Array 10711872 - -
Affymetrix Rat Gene 1.0 ST Array 10711873 - -
Affymetrix Rat Gene 1.0 ST Array 10711864 - -
Affymetrix Rat Gene 1.0 ST Array 10711863 - -
Affymetrix Rat Gene 1.0 ST Array 10711857 - -
Affymetrix Rat Gene 1.0 ST Array 10711870 - -
Affymetrix Rat Gene 1.0 ST Array 10711859 - -
Affymetrix Rat Gene 1.0 ST Array 10711871 - -
Affymetrix Rat Gene 1.0 ST Array 10711862 - -
Affymetrix Rat Gene 1.0 ST Array 10711861 - -
Affymetrix Rat Gene 1.0 ST Array 10711868 - -
Affymetrix Rat Gene 1.0 ST Array 10711867 - -
Affymetrix Rat Gene 1.1 ST Array 10711852 - -
Rat Genome 230 2.0 Array 1371115_at - -
Rat Genome 230 2.0 Array 1371115_PM_at - -
Affymetrix HT Rat Focus Array 1371115_at - -
Affymetrix HT Rat Focus Array 1371115_PM_at - -
Affymetrix Rat Clariom S Assay PSR0100065569.rn.1 TC0100008058.rn.1 RTA TC
Rat Expression Set 230 1371115_at - -
Rat Expression Set 230 1371115_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10711852 - -
Rat Genome U34 Set D78613_s_at - -
Rat Genome U34 Set D78610_at - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1362978 - -

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