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See other ABCG5 GE Assays ›
Gene Symbol:
Abcg5
Gene Name:
ATP-binding cassette, subfamily G (WHITE), member 5
Gene Aliases:
-
Chromosome Location:
Chr.6: 7935771 - 7961339 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01499073_m1
Best Coverage
Size
Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Abcg5
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_053754.2 NP_446206.2 12 - 13 1829 70
XM_008764452.1 XP_008762674.1 13 - 14 2069 70
GenBank mRNA AF312714.3 - 12 - 13 1829 70

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600001823.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Transporter 3' Most Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Abcg5

Panther Classification:

Molecular Function -

ATP-binding cassette (ABC) transporter primary active transporter transporter

Gene Ontology Categories:

Function(s) Process(es)

response to nutrient
excretion
metabolic process
response to ionizing radiation
negative regulation of intestinal phytosterol absorption
sterol transport
regulation of intestinal cholesterol absorption
cholesterol transport
cholesterol efflux
response to drug
cholesterol homeostasis
negative regulation of intestinal cholesterol absorption
ATP binding
ATPase activity
cholesterol transporter activity
protein heterodimerization activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P12924 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 549475 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 148726 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 930971 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 207565 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 470148 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 638986 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 386409 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 410550 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 537103 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 643466 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 148372 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 807556 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 604311 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 63492 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 112523 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 153169 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 404571 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 7714 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 721721 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 97967 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 1254 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 66859 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P12924 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P12924 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P12924 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P12924 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 38822 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 99652 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10888200 - -
Affymetrix Rat Gene 1.0 ST Array 10888209 - -
Affymetrix Rat Gene 1.0 ST Array 10888201 - -
Affymetrix Rat Gene 1.0 ST Array 10888206 - -
Affymetrix Rat Gene 1.0 ST Array 10888204 - -
Affymetrix Rat Gene 1.0 ST Array 10888198 - -
Affymetrix Rat Gene 1.0 ST Array 10888205 - -
Affymetrix Rat Gene 1.0 ST Array 10888208 - -
Affymetrix Rat Gene 1.0 ST Array 10888203 - -
Affymetrix Rat Gene 1.0 ST Array 10888207 - -
Affymetrix Rat Gene 1.0 ST Array 10888202 - -
Affymetrix Rat Gene 1.0 ST Array 10888199 - -
Affymetrix Rat Gene 1.0 ST Array 10888197 - -
Affymetrix Rat Gene 1.1 ST Array 10888196 - -
Rat Genome 230 2.0 Array 1369455_PM_at - -
Rat Genome 230 2.0 Array 1369455_at - -
Affymetrix HT Rat Focus Array 1369455_PM_at - -
Affymetrix HT Rat Focus Array 1369455_at - -
Affymetrix Rat Clariom S Assay PSR0600012941.rn.1 TC0600001823.rn.1 RTA TC
Rat Expression Set 230 1369455_at - -
Rat Expression Set 230 1369455_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10888196 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21267604 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1358631 - -
RatRef-12 Expression BeadChip ILMN_53713 - -

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