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See other RRP8 GE Assays ›
Gene Symbol:
Rrp8
Gene Name:
ribosomal RNA processing 8, methyltransferase, homolog (yeast)
Gene Aliases:
RGD1308302
Chromosome Location:
Chr.1: 170574670 - 170578693 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01509997_g1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Rrp8
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001008346.1 NP_001008347.1 6 - 7 1318 83
GenBank mRNA BC085119.1 - 6 - 7 1318 7108537 83

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100006298.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rrp8

Gene Ontology Categories:

Function(s) Process(es)

chromatin silencing at rDNA
transcription, DNA-templated
rRNA processing
chromatin modification
methylation
cellular response to glucose starvation
regulation of transcription by glucose
positive regulation of cell cycle arrest
intrinsic apoptotic signaling pathway by p53 class mediator
methyltransferase activity
methylated histone binding
poly(A) RNA binding

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P069819 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 714754 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 39361 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 958933 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 97925 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P069819 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P069819 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P069819 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P337579 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10724523 - -
Affymetrix Rat Gene 1.0 ST Array 10724520 - -
Affymetrix Rat Gene 1.0 ST Array 10724519 - -
Affymetrix Rat Gene 1.0 ST Array 10724522 - -
Affymetrix Rat Gene 1.0 ST Array 10724518 - -
Affymetrix Rat Gene 1.0 ST Array 10724517 - -
Affymetrix Rat Gene 1.0 ST Array 10724521 - -
Affymetrix Rat Gene 1.1 ST Array 10724516 - -
Rat Genome 230 2.0 Array 1376681_at - -
Rat Genome 230 2.0 Array 1376681_PM_at - -
Affymetrix HT Rat Focus Array 1376681_PM_at - -
Affymetrix HT Rat Focus Array 1376681_at - -
Affymetrix Rat Clariom S Assay PSR0100049700.rn.1 TC0100006298.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0100049701.rn.1 TC0100006298.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0100049703.rn.1 TC0100006298.rn.1 RTA TC
Rat Expression Set 230 1376681_PM_at - -
Rat Expression Set 230 1376681_at - -
Affymetrix Rat Gene 1.0 ST Array 10724516 - -
Rat Genome U34 Set rc_AI177038_at - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1349140 - -
RatRef-12 Expression BeadChip ILMN_59493 - -

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